Protein

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Genbank accession
ARM67879.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDFSKDGIYKEAKLTALDEPRLVPITTEQLVFYNLDINTAMLTFQLKKGVYPLQVSKTNADIHCFFESTNGSQTDRANIEFVDSLNGIIRFTVDNDFLSASTDTWVTGQIYLKAVGREDTVVLNEFRFFVKDALINKIGADIKVKTIRQIDKLVIDARKKIDEEINSLTRLKDVRLEFDSFVTKQKSDLNKTINDTKDEMNNIKDSAEKSVDAQLERLRIESDDVLKKIQDSSDVVNKAELDAMLSDYVKSNDFKTELDKKANIGDVTQPSALEQLINAKVDERLAKVTTPYTFTDANGYIPRLENPDFDSMSNIDKSGLFYAYNPVNSPDTENESGYLFVIARSSTYKKVIFMPYNKHTMYSRNKLGSTTGWGKWHNITSQFSN
Physico‐chemical
properties
protein length:386 AA
molecular weight: 43896,92100 Da
isoelectric point:5,22120
aromaticity:0,09326
hydropathy:-0,49767

Domains

Domains [InterPro]
DC_1215
STR
1–374
DC_1215
G3DSA:2.60.40.3350
ATT
25–138
G3DSA:2.60.40.3350 Coil cd19958
IPR018913
ATT
27–140
IPR018913
ARM67879.1
1 386
Architecture
STR
ATT
STR
STR 1-24 | ATT 25-140 | STR 141-377 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage IME1323_01
[NCBI] 		1965487 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus caprae
[NCBI] 		29380 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM67879.1 [NCBI]
Genbank nucleotide accession
KY653117 [NCBI]
CDS location
range 34990 -> 36150
strand +
CDS
ATGAGTGATTTCTCAAAAGATGGCATTTATAAAGAGGCAAAATTGACTGCACTTGATGAACCTCGTTTAGTTCCTATTACTACAGAACAATTAGTTTTCTACAATTTAGACATCAATACAGCAATGCTAACGTTCCAACTCAAAAAAGGTGTATATCCTTTACAAGTTAGTAAAACGAATGCTGATATACATTGTTTCTTTGAATCTACAAACGGATCTCAAACAGATAGAGCCAATATCGAATTTGTAGATAGCTTAAACGGAATTATTAGATTTACGGTTGATAATGACTTTTTAAGTGCTTCAACAGATACATGGGTAACTGGACAAATCTACTTAAAAGCTGTTGGACGCGAGGACACGGTTGTTTTAAACGAATTTCGTTTTTTTGTAAAGGACGCATTGATCAATAAAATAGGTGCAGACATCAAAGTTAAGACTATTAGACAAATAGACAAACTTGTTATAGATGCACGAAAGAAAATTGATGAGGAAATCAATAGTTTAACAAGATTAAAAGATGTGAGACTTGAATTCGATTCATTTGTAACTAAGCAAAAATCAGATTTAAATAAGACAATCAATGATACTAAAGACGAAATGAACAATATTAAAGATTCAGCTGAAAAAAGTGTTGACGCTCAACTTGAACGGTTACGCATTGAATCAGACGATGTGCTTAAAAAGATACAAGATTCTAGCGATGTAGTGAATAAAGCAGAATTAGATGCTATGCTATCCGATTATGTTAAAAGTAATGATTTCAAGACTGAACTAGACAAAAAAGCGAATATCGGAGATGTGACTCAACCTAGCGCTTTAGAACAACTCATAAATGCTAAAGTTGATGAACGTTTAGCAAAAGTTACTACGCCTTACACATTTACAGATGCAAACGGTTATATCCCTAGACTCGAAAATCCTGATTTTGATTCAATGAGTAATATTGATAAATCGGGATTATTTTATGCTTATAACCCTGTTAACTCTCCAGATACAGAAAATGAAAGTGGTTATTTATTCGTTATTGCTCGTAGTTCTACGTATAAGAAAGTGATATTTATGCCTTACAACAAACACACAATGTATTCTAGAAACAAACTAGGTTCTACGACTGGTTGGGGTAAATGGCACAACATCACGTCACAATTTAGTAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
adaa27ca718e419303575f90cba5f7432fc7d51a6f797585a7ce7541458202f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of active prophages from bacterial high-throughput sequencing data Sun,Q., Zhang,X., Xing,S. and Tong,Y.-G. 2018-12-28 — GenBank