Protein

View in Explore
Genbank accession
UYD60196.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MPIRIADQNGVLHNAAPKIYNGYWRNAVAWVYSGGAWRRTYDPKDENLLINSRLLNGTDYFTYADGRVIGFTPPGWSAFSNAPQVGGNAYAFYSNREDEYSRAYTFKAATSRMFFRTRIYLKAGETYNASAFVHSINLQVGRKSFDIYVDGVSSDKQKEYIQFITQFPTVPELKAGMRVQSTFKALKDCLVQFNIGVGVDYNDSGEIQVSQPMVTKSSVMLAYQPTPVDANYNAIIMKDTYMKLNKTLPPIAGTNHLESSVQLLDDVSDRIMIIGYNNDISTSGIGVDIVKNTLFVMAENVITHEVPIITPIPKNQVFGAGIWYDVSGGYIRNIRLHANGDLIARIPDTTSVVAATNFVFGSKQYPIKGVIVEQFGMFVNGRNHIFNIEEGTGNISSETPSPDMLTVDFGSDDTKYEWLGALLPKITVQPDSEYIGTSGMTVELKSSGSNYDTIEWRTQYGAIENSNSNNLSVIVSDTYDYSLVYQAVYKNRFGSVSTIKTKISEFPTPRRLIQDEKGDQLGTEDDKLIETQKP
Physico‐chemical
properties
protein length:534 AA
molecular weight: 59545,29330 Da
isoelectric point:5,45088
aromaticity:0,11236
hydropathy:-0,29345

Domains

Domains [InterPro]
DC_1300
ATT
2–45
DC_1300 DC_0441
UYD60196.1
1 534
Architecture
ATT
STR
ATT 2-45 | STR 214-505 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD60196.1
1 534
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,1344
Central domain 228 437 211 0,5475
C-terminal 438 534 96 0,1876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-437
C-terminal
438-534

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM12-TAAL
[NCBI] 		3101605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD60196.1 [NCBI]
Genbank nucleotide accession
OP380604 [NCBI]
CDS location
range 132826 -> 134430
strand -
CDS
ATGCCAATTAGAATTGCTGATCAAAATGGGGTGCTGCATAATGCAGCCCCCAAAATTTATAACGGATATTGGAGAAATGCCGTTGCTTGGGTTTATTCTGGTGGAGCATGGCGTAGAACTTATGATCCAAAAGATGAAAACTTGCTAATCAATAGCCGTTTATTGAACGGAACAGATTATTTCACGTATGCGGACGGAAGAGTAATCGGATTTACACCACCGGGCTGGAGCGCATTTTCTAATGCTCCTCAAGTTGGTGGAAATGCGTATGCGTTCTATTCGAATCGCGAGGACGAATATAGCCGAGCGTATACATTCAAAGCGGCAACAAGTCGAATGTTCTTTAGAACTAGAATTTATCTTAAAGCTGGTGAAACGTATAACGCAAGTGCTTTTGTTCATTCTATTAATCTTCAAGTAGGAAGAAAGTCATTTGATATCTACGTTGACGGAGTTTCATCTGATAAACAGAAAGAATATATTCAGTTCATTACACAGTTTCCTACTGTTCCTGAATTGAAAGCAGGTATGAGAGTGCAATCAACTTTCAAAGCATTAAAAGATTGTTTGGTGCAGTTTAATATCGGTGTTGGAGTTGATTACAACGACAGTGGAGAAATCCAAGTTAGTCAGCCCATGGTAACTAAGTCGAGTGTTATGCTTGCTTACCAGCCTACTCCAGTTGATGCCAACTACAATGCGATTATCATGAAAGACACATACATGAAGCTGAATAAAACGCTTCCTCCAATCGCAGGAACAAATCATTTGGAGTCTAGTGTTCAGTTGCTTGATGATGTATCGGATCGCATAATGATCATTGGATATAATAACGATATTTCGACCTCCGGAATCGGAGTTGATATCGTTAAAAATACGCTGTTTGTTATGGCAGAAAACGTTATTACACATGAAGTACCTATTATAACTCCTATTCCGAAGAATCAGGTATTTGGTGCAGGAATCTGGTATGATGTTTCTGGTGGATACATTAGAAATATTAGATTACACGCAAACGGAGATTTAATAGCTAGAATTCCAGACACAACTTCGGTTGTTGCTGCTACTAATTTTGTGTTCGGTAGTAAGCAGTATCCTATTAAAGGAGTCATAGTTGAGCAATTCGGTATGTTCGTAAACGGAAGAAACCATATTTTCAACATCGAAGAAGGAACGGGAAATATTTCGAGTGAAACTCCTAGTCCTGATATGTTGACTGTTGATTTTGGGTCAGACGATACGAAATACGAGTGGCTCGGCGCATTGCTGCCTAAGATTACAGTTCAACCTGATTCTGAATATATCGGAACATCTGGTATGACGGTAGAGCTTAAATCATCCGGAAGCAATTACGACACAATAGAATGGAGAACTCAATACGGAGCAATCGAGAATTCGAACTCGAATAATCTAAGTGTTATTGTTTCTGATACTTATGATTATAGTCTTGTTTATCAAGCAGTTTATAAGAATCGATTCGGAAGTGTGAGTACAATAAAAACAAAAATCTCCGAGTTCCCTACTCCTAGACGATTGATCCAGGACGAAAAGGGAGATCAGTTGGGTACTGAGGACGATAAGTTAATCGAAACCCAAAAGCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
737cb9431338ded76d81c7d43a70971b5abfd7d7ad6be943be0137e32fadba70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank