Protein

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Genbank accession
XDQ96107.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MQNSNRPTRFVLPFAQNDGSKVEIPVTTTDATRASLSLGFPPLTMTPPEAGGVPPQGEDFNGAMNQVARAVRWLAAGTFWPYDATFSGDTNVGGYPQGAIIQNSTFAGWLGSRVENNTTNPTAGQTGNWGPLTNAGYEIVMATGTAASLSLTDEQAASGYVRLTGTVFRNTSIVLPTTTGLNFSFIHDAANDTTAPTAVISVVDGYSNSVLVYPGQRVNFRTRNDGRLVAVSTGAAPNQFSSLQTVSGAATLPTTYAGALVLLTGASNYTVTLPLASTFAPGAPIDFMSESTAVVTIARQGTSDTITGNGSVSGLTSLVMYSGDKLTLVSDGTKWHAQAGTTAMQFATSQNNVKTTTTNTTLDGSYARITTVMTGSVSYNNTLPAANSVQPGTPFNFLSVNSATITLARAGADNIVVNNAGQTLATLSFASGDTGQLVSDGVSKWYLVDGSVQAYYARTVGSFPGVVGGASNLKVVQTSASSAMSPTANEIVVEDQLGGRPYVVASVTGTINIATTGANGMDTGSAPVSGNVGVYLIYNPITKAQAFLGVNATSAAIANIYAGANMPAGYTHSALISVWPTDSSGRFVIGGQTDRTVSLTPTLQVNTTTQQTSPTSVTITGGVPPNARAVYGYMLVQTTASSALACSVAATSTNLMLSPVALQNGVLIEGVFTRLPLITPQTVYYTCSAGSGTMTFQLSTTGYDF
Physico‐chemical
properties
protein length:705 AA
molecular weight: 72563,07090 Da
isoelectric point:5,15680
aromaticity:0,07801
hydropathy:0,07730

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ96107.1
1 705
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9952
Central domain 139 337 200 0,1584
C-terminal 338 705 367 0,7292
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-705

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RS-CA1
[NCBI] 		3120099 No lineage information
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ96107.1 [NCBI]
Genbank nucleotide accession
PP316169.1 [NCBI]
CDS location
range 35999 -> 38116
strand -
CDS
ATGCAAAACAGCAACCGCCCGACTCGCTTTGTTCTGCCCTTCGCGCAGAACGATGGCAGCAAGGTCGAGATCCCGGTCACGACCACGGACGCGACGCGCGCTAGCCTGTCGCTTGGTTTCCCTCCGCTGACCATGACACCGCCCGAGGCAGGCGGCGTGCCCCCGCAGGGCGAAGACTTCAACGGTGCGATGAACCAAGTCGCGCGCGCCGTGCGCTGGCTGGCCGCGGGCACGTTCTGGCCCTACGATGCAACGTTCTCGGGTGATACGAACGTTGGCGGCTACCCGCAGGGCGCGATCATCCAGAACTCGACGTTCGCAGGGTGGTTGGGCAGCCGTGTCGAGAACAACACGACCAACCCGACGGCCGGGCAAACTGGCAATTGGGGCCCGTTGACCAATGCTGGCTATGAGATCGTCATGGCCACCGGCACGGCCGCCTCGCTGTCACTGACCGACGAGCAGGCTGCTTCGGGCTATGTGCGTTTGACCGGCACCGTGTTCCGCAACACGTCGATCGTGTTGCCGACTACCACCGGGCTGAACTTCTCGTTCATCCACGACGCGGCCAATGACACCACCGCGCCCACGGCTGTGATCTCAGTTGTGGATGGCTACAGCAACTCGGTGCTGGTGTACCCGGGCCAGCGCGTGAATTTCCGCACGCGCAACGATGGGCGCCTTGTGGCCGTCTCGACGGGCGCCGCACCGAACCAGTTTTCGAGCCTGCAGACCGTTAGCGGCGCGGCGACGCTGCCGACGACCTACGCCGGCGCGCTGGTGTTGCTCACGGGGGCCAGCAACTACACCGTGACACTACCGCTGGCGTCGACGTTTGCGCCTGGCGCGCCGATTGATTTCATGTCGGAGTCGACCGCTGTGGTGACGATCGCGCGCCAGGGCACGAGCGATACGATCACCGGCAACGGCAGTGTGTCCGGGCTGACGTCGTTGGTCATGTACAGCGGCGACAAACTGACACTCGTGTCGGACGGCACCAAGTGGCACGCGCAGGCCGGCACGACGGCGATGCAGTTTGCGACCTCGCAAAACAACGTCAAAACGACCACCACCAACACCACGTTGGACGGTTCGTATGCGCGCATCACGACGGTGATGACCGGGTCGGTCTCCTATAACAACACGCTTCCGGCGGCCAACAGTGTGCAGCCGGGTACGCCGTTCAACTTCCTGTCAGTCAACTCGGCCACGATCACGCTGGCACGCGCCGGTGCCGACAACATCGTCGTCAACAATGCAGGGCAGACGCTGGCCACACTGTCGTTTGCCAGCGGTGATACGGGACAGCTGGTCAGCGACGGGGTGTCGAAGTGGTATCTGGTCGACGGTTCGGTACAAGCGTATTACGCACGCACTGTGGGGTCGTTCCCTGGTGTGGTCGGAGGCGCGAGCAATCTGAAGGTGGTGCAAACCAGCGCCAGCAGCGCTATGTCCCCCACGGCTAACGAGATCGTCGTCGAGGACCAGCTCGGCGGACGGCCTTATGTCGTAGCCTCGGTTACAGGTACGATCAACATCGCGACCACCGGCGCGAACGGGATGGATACGGGGAGCGCCCCCGTCTCGGGCAACGTCGGTGTCTATTTGATCTACAACCCGATCACCAAGGCTCAAGCGTTCCTAGGCGTCAACGCGACAAGCGCTGCAATCGCGAACATCTACGCCGGGGCGAACATGCCCGCGGGGTACACGCACTCGGCGCTGATCTCGGTATGGCCGACCGACAGCAGCGGACGCTTTGTGATCGGGGGGCAAACAGATCGTACGGTAAGTTTGACGCCGACGCTGCAGGTCAACACAACCACGCAGCAAACATCCCCGACGTCTGTGACAATCACGGGTGGGGTGCCACCGAACGCGCGCGCGGTGTACGGTTACATGCTGGTGCAAACCACGGCGAGTAGCGCGTTGGCCTGTTCCGTAGCGGCGACGAGCACCAATCTGATGCTCTCACCTGTTGCACTCCAAAACGGCGTGCTGATTGAGGGAGTATTCACTCGGCTGCCGCTGATTACGCCTCAGACGGTGTACTACACCTGTTCTGCCGGCTCTGGGACAATGACGTTCCAGCTGTCGACGACTGGTTACGACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d25d04b624477dfcb2b2379e5b9068fd5ab7f83c9a7aa0e779e61a2e8741c11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50