Protein

View in Explore
Genbank accession
WEU70085.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MKLDNLITKLHSYFSQKFVSQLENNFEQIKYWTNKSDDSFNEHLTTQKNAHTTDQIKHKTTKGKDVVLSNHENYQDELIEHLVLGHNGDGNNELKASHTSMDAQSFDSLHQRLYHDFLRESNAREELRADLTKKIQRIVNVDDFGGDPTGQKDSTKAFQDALGNGNVQVTMSGGTYLTTGIKMPNNSRLVGQGKDITTIKFMDETPAENIGITNLKMSGGAENISLESFSFNGNKFRQNKTLKATGGSRSSNIRFAGVTNGYIYNVKSYDALLHCIDVTYANDNYYYEGDGNRVPYALESKHIHIDNCEVYGCGDDGITTHHSRYITISNCYAHTPTGGSNNNGVEIDDGSQYVFLSNNRTKGNFGGLEIKAHSNASAASGVFVNGHVSIEDTRAYNIRHIGHHRAKTDNKSLTAYDVVLNNCLALNPKYNGVYPGSTPRALLISAYKNVSVNNFTAIGDDDFGKLEGGKLDKKQPAIAIQFMSENISLNNINVRNFKNAEVDIRLFGGDNRPSRVILNNINIWNSSNNIGIGVGSKIYDTKITNCNLHGNGSGIGLRLTNNHAMISGITANNYSTPAWIAGEKYDTPPTVGKGGASIASTGSAGVANASAVIASTGGSKAYSNRSFVLGSGANSKSYGSRSGIINSLNSETDKSGHTQLILNSNRVKSPGNYHVVAGYGSSGNASTSNIKFDLSTYSGNLTLAGQLKQDSADIAELFESQNGLAIDLGTIVTLDGDKIRKAQPSDEPIGVISGTAALVANEKTFHHKDRFLKNEYGVTITNRKQVEFVDDEGNVSFEWRDVPVENPDYDDSISYESRSERPEWNVVGLLGQIYTNIEKDVIPGDYINGRAGVGYKDNVNGKGRVMKITSEYTEERGCAIALVLWGAK
Physico‐chemical
properties
protein length:888 AA
molecular weight: 96804,87060 Da
isoelectric point:6,39322
aromaticity:0,07995
hydropathy:-0,54595

Domains

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SepS_BE21
[NCBI] 		3028897 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WEU70085.1 [NCBI]
Genbank nucleotide accession
OQ355700 [NCBI]
CDS location
range 36128 -> 38794
strand -
CDS
TTGAAATTAGATAACTTAATTACGAAACTTCACTCGTACTTTAGTCAAAAGTTTGTAAGTCAACTTGAGAATAACTTCGAACAAATAAAATACTGGACTAATAAAAGTGATGATAGCTTTAACGAGCATTTAACCACTCAAAAAAATGCGCATACAACTGATCAAATCAAACACAAAACTACAAAAGGTAAAGATGTCGTATTATCTAATCATGAAAATTATCAAGATGAACTTATTGAACATCTTGTGTTAGGTCATAACGGTGATGGCAATAACGAATTAAAAGCTAGTCACACATCAATGGACGCTCAAAGTTTCGATTCTTTACACCAACGTCTATATCACGACTTTTTAAGAGAAAGTAACGCTAGAGAAGAACTAAGAGCCGACTTAACTAAGAAAATACAACGTATTGTTAACGTTGATGACTTTGGCGGAGATCCTACAGGTCAAAAGGACAGTACGAAAGCTTTCCAAGACGCATTAGGTAACGGCAATGTACAGGTAACTATGAGTGGTGGTACTTACCTTACAACAGGTATTAAAATGCCTAACAACTCTCGTTTGGTAGGACAAGGTAAAGACATTACTACAATTAAGTTTATGGACGAAACACCTGCAGAAAATATTGGTATCACTAACTTAAAAATGAGTGGTGGAGCTGAAAACATTTCATTAGAAAGTTTTTCGTTCAACGGGAATAAGTTTAGACAAAATAAAACACTTAAAGCTACCGGTGGTTCTCGTTCATCTAACATTAGATTTGCGGGTGTAACTAATGGATATATCTATAACGTTAAATCATATGACGCTTTACTACACTGTATCGATGTAACATATGCAAATGACAATTATTACTACGAAGGCGATGGAAACAGAGTGCCTTACGCATTAGAAAGTAAGCATATTCATATTGATAATTGTGAGGTATATGGTTGCGGAGATGATGGTATCACTACCCATCACTCTCGTTACATTACAATTTCTAATTGTTATGCACATACACCAACAGGCGGAAGTAATAACAACGGTGTAGAAATTGACGATGGCTCACAATATGTGTTCTTATCAAACAACAGAACCAAAGGTAACTTCGGTGGTTTAGAAATCAAAGCACACAGTAATGCAAGTGCTGCAAGTGGTGTGTTCGTTAACGGTCACGTATCAATCGAAGATACAAGAGCTTACAACATTCGACACATCGGTCATCATAGAGCTAAAACGGACAATAAAAGTTTGACTGCTTATGACGTGGTGCTAAATAATTGCTTAGCTTTAAACCCTAAATACAATGGTGTGTATCCAGGCTCAACACCTAGAGCATTATTAATCAGTGCTTATAAAAATGTATCAGTCAATAATTTCACTGCAATTGGTGATGATGATTTCGGAAAATTAGAAGGTGGAAAACTAGATAAAAAACAACCAGCAATAGCCATCCAATTCATGTCCGAAAACATCTCGCTTAATAATATTAATGTGCGTAACTTTAAAAATGCAGAAGTAGATATTAGATTATTTGGCGGAGATAATAGACCTTCAAGAGTTATTTTAAACAATATCAATATTTGGAATTCATCTAACAATATCGGTATCGGTGTTGGAAGTAAAATATACGATACTAAAATAACTAATTGTAACTTACACGGTAATGGTTCGGGCATAGGATTACGTTTGACAAATAACCACGCTATGATTAGTGGTATCACAGCAAACAATTATTCAACACCTGCATGGATAGCCGGCGAAAAATACGACACACCTCCTACAGTTGGAAAAGGTGGTGCTAGTATAGCGTCTACAGGAAGTGCAGGCGTAGCTAATGCTAGTGCAGTTATTGCGTCAACAGGTGGTTCGAAAGCATACAGTAATCGTAGCTTTGTATTAGGTTCTGGTGCTAACTCCAAATCTTATGGATCACGTAGTGGTATTATCAACTCGTTAAATTCAGAAACAGACAAGTCAGGACACACACAATTAATTCTTAATAGTAATCGTGTTAAGTCACCTGGTAACTATCATGTTGTCGCTGGATATGGTTCTAGTGGTAATGCTTCTACATCTAACATTAAATTTGATTTAAGCACTTATTCAGGAAACTTAACTTTAGCAGGTCAACTTAAACAAGATAGTGCCGATATCGCAGAGTTATTTGAGTCACAAAATGGATTAGCAATTGATTTAGGAACTATCGTTACTTTAGACGGAGATAAAATAAGAAAAGCACAACCTAGCGACGAGCCTATTGGTGTTATTTCTGGCACTGCTGCATTAGTCGCTAATGAAAAAACATTCCACCATAAAGACAGATTCTTAAAGAACGAATACGGTGTAACAATTACAAACAGAAAACAAGTTGAGTTTGTAGACGATGAGGGCAACGTTTCATTCGAATGGCGTGATGTACCAGTAGAAAACCCTGATTATGACGATAGCATTAGTTACGAATCTCGTTCAGAAAGACCTGAATGGAATGTAGTCGGATTATTAGGCCAAATCTACACAAACATTGAAAAAGACGTTATACCAGGTGACTATATCAATGGTAGAGCAGGTGTGGGTTACAAAGATAATGTAAATGGTAAAGGTAGAGTCATGAAGATAACTTCTGAATACACTGAAGAACGTGGCTGTGCAATAGCATTAGTATTGTGGGGTGCTAAATAA

Tertiary structure

PDB ID
028a16e0c4c93fcf2df2a3340d497c2a35159d13bb702a1a436c18ff0349e9db
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of bacteriophages targeting S. epidermidis from the skin of LVAD patients Pitton,M. 2021 — GenBank