Protein

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Genbank accession
AVP40193.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAVRYDIFTTREDGEVMLDELMSADWAALQVNVMPLDSSGEYTPLVSGTVSVKVSPFESGDYWIDVNNNNYYGMALRLKIIKNQLPVAVSSLRVSVWRAGVSPQSVVNVSPEVNVSNVTSQSYSERANKQGKLFTASRRVTDVAGSSNLDSIFITGTKQVIFNQRIIGYTGKGVVASIYRGAVATGGTAAEINNPNDITPQAATAQLLTGATVTSVGQLTVAATYSEGNASNQGQGNSQARLGEQIIMAPNTTYLLRITSLDTAAQNINAYVSWFEDDTYLA
Physico‐chemical
properties
protein length:282 AA
molecular weight: 30258,46870 Da
isoelectric point:4,84447
aromaticity:0,07801
hydropathy:-0,08404

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS Sa179lw
[NCBI] 		2126819 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVP40193.1 [NCBI]
Genbank nucleotide accession
MH023293 [NCBI]
CDS location
range 3928 -> 4776
strand +
CDS
ATGGCTGTAAGATACGACATATTCACCACGCGGGAAGATGGTGAGGTGATGCTTGATGAACTGATGTCTGCTGACTGGGCGGCGCTACAGGTTAACGTAATGCCGCTTGATTCATCTGGCGAATACACTCCACTTGTCAGCGGCACCGTGTCCGTTAAGGTATCACCATTTGAATCAGGTGACTACTGGATTGATGTTAACAATAATAATTATTATGGCATGGCGCTACGCCTGAAGATAATCAAAAACCAGCTGCCAGTAGCGGTTAGTTCACTGCGTGTTTCTGTGTGGCGCGCAGGAGTGTCGCCGCAATCGGTAGTTAACGTGTCGCCAGAAGTGAATGTGAGCAATGTCACTTCACAGTCATATTCTGAGCGAGCTAATAAGCAGGGTAAACTGTTCACTGCATCACGCAGAGTGACGGATGTCGCTGGTAGTTCAAACCTTGACAGCATATTCATCACCGGAACGAAGCAGGTAATATTCAACCAGCGCATTATTGGCTACACAGGAAAGGGCGTTGTTGCATCAATCTATCGTGGCGCGGTGGCTACTGGCGGAACTGCTGCGGAGATTAATAACCCTAACGATATAACTCCGCAGGCAGCCACGGCGCAGCTACTTACTGGCGCTACGGTAACAAGCGTCGGGCAGCTAACGGTCGCGGCAACGTACAGCGAGGGTAATGCTTCAAATCAGGGACAGGGGAACTCGCAGGCGCGGCTTGGTGAGCAAATCATCATGGCACCAAACACGACATATTTGCTTCGCATAACATCACTGGATACGGCGGCGCAGAATATCAATGCGTATGTTTCGTGGTTTGAGGATGATACTTATCTGGCGTGA

Tertiary structure

PDB ID
1da27b1ffef4625b7ffe90fcd38fb60bc58cdaf19265545b277631793a73099a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Phage vB_EcoS Sa179lw Isolated from Surface Water in a Produce-Growing Area in Northern California Liao,Y.-T., Liu,F., Sun,X., Li,R.W. and Wu,V.C.H. 2018 29976601 GenBank