Protein

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Genbank accession
AJT60975.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIEVNIDDLLKNGKVTFEFEKADGSIKTVTGTRNLDFIPAEFHPKEKPLAEGETKPEKTEKQKATCGYFDLEANGWRSFKRANLREVKSFD
Physico‐chemical
properties
protein length:91 AA
molecular weight: 10395,61940 Da
isoelectric point:5,88593
aromaticity:0,09890
hydropathy:-0,81758

Domains

Domains [InterPro]
IPR024401
STR
6–84
IPR024401
AJT60975.1
1 91
Architecture
STR
STR 6-84 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ValKK3
[NCBI] 		1610855 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus valkk3
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJT60975.1 [NCBI]
Genbank nucleotide accession
KP671755.1 [NCBI]
CDS location
range 56888 -> 57163
strand -
CDS
ATGATTGAAGTGAATATCGACGACTTGCTGAAAAATGGTAAAGTCACATTTGAATTTGAGAAAGCAGATGGTTCTATTAAGACTGTAACTGGTACGCGCAATCTCGACTTCATCCCTGCTGAGTTTCACCCGAAAGAAAAGCCTTTAGCTGAAGGTGAGACAAAGCCAGAGAAAACAGAAAAGCAAAAAGCGACATGCGGTTACTTCGATCTTGAAGCTAATGGCTGGCGTTCATTCAAACGAGCTAATTTACGCGAAGTGAAATCGTTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3475709b62945926dede4201c64738e2cbfaa807b5f86bc9227cc3cf2fd3216
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8958
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a giant Vibrio phage ValKK3 infecting Vibrio alginolyticus Lal,T.M., Sano,M., Hatai,K. and Ransangan,J. 2016 27114905 GenBank