Protein

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Genbank accession
CEK40237.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MLNEDVVKNINKLNNEQDNINLELSKKASKEDLDKLIQGGTNVAISKDISTDDWTIEEGVYTTIVEHNLVTRKVIISLIDKTTNNNVFCSYQILNDNSIKIFNESNNELECIAINGNSAINMVSATINDNRSTETTTYSSVKIEALLKVLESKIDDIENFKEVDNIRCTTDTGEYTIENSKKGYLTNFNIEGGTLVNLASTDMFTLEGNSTKEGDFIKLNNSAVYVNLLNRLNTGIYTLIVNVTDINVSYTIHTILSEGGNKEVFTKNGNQVLKLNMDNNIDKLRVYTTDSSTLDIQMVLLEGDYTNTDISYFEGLQSVGQGDNIKLLSYQGKNLFDGTYQDGYFDGNSLEEELIQGMPCITTNWIECSPNVEYYFLGGNRKQIQFKKGDNIFKSVILNSNNFETPTDCTHFRLYYARTDQFYSQLNIYKKGDIKIIPYTLRGLSSEIKDRIIYKNNGHKLIQRCEEITLNGQENWIQHGNSNDKTLIFYAKITEGSYNNSDNIELKCNRFKGIRIITNTFTEEGVYENRDGNIYIRILRSRLATQDLTGFKTWLNNNNVTFIRQLKENKEIKLVDLGLKTFEGETRFVTQIGNIIPTINFEVTQNFGSNIEILKNKINTLESMCTYSKTIDLSGKLINGWTLFSDVHRNLVITKNGNIVTIIGSIKGGTTSNGTVICKIPDGMIPKANQLFQVFNTIGTSVGLLYINSYGDFKVNSLTSNTAVIINAQYILD
Physico‐chemical
properties
protein length:733 AA
molecular weight: 82749,25750 Da
isoelectric point:5,15663
aromaticity:0,08731
hydropathy:-0,35211

Domains

Domains [InterPro]
Coil
Unmapped
3–30
Coil DC_0993
CEK40237.1
1 733
Architecture
RBD
RBD 420-733
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CEK40237.1
1 733
Domain Start End Length (AA) Confidence
N-terminal 1 50 50 0,8256
Central domain 51 249 200 0,0393
C-terminal 250 733 483 0,7369
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-50
Central
51-249
C-terminal
250-733

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD24-1
[NCBI] 		1582149 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CEK40237.1 [NCBI]
Genbank nucleotide accession
LN681534.1 [NCBI]
CDS location
range 25782 -> 27983
strand +
CDS
TTGTTAAATGAAGATGTAGTAAAAAATATTAATAAATTAAATAATGAGCAGGATAATATTAACTTAGAACTTAGTAAGAAAGCGAGTAAGGAAGATTTAGATAAACTAATTCAAGGTGGCACTAATGTAGCTATATCTAAAGATATATCGACAGATGATTGGACAATAGAAGAAGGTGTATATACAACTATAGTTGAACATAATCTTGTAACTAGAAAGGTGATTATAAGCTTAATAGATAAAACTACTAATAACAATGTATTTTGTTCATATCAAATTTTAAATGATAATAGTATAAAAATTTTTAATGAATCAAACAATGAACTAGAATGTATAGCTATAAATGGAAATTCAGCTATAAATATGGTTTCAGCAACTATTAATGATAATAGAAGTACTGAAACAACTACTTATTCTTCTGTAAAGATAGAAGCTTTATTAAAAGTTTTAGAAAGTAAAATTGATGATATAGAAAACTTCAAGGAAGTTGACAATATAAGATGCACTACTGATACAGGGGAATATACAATAGAAAATAGCAAAAAAGGTTATCTAACTAATTTCAATATAGAAGGAGGGACACTAGTTAATTTAGCATCTACAGATATGTTTACTTTAGAAGGAAACAGTACTAAAGAAGGCGATTTTATCAAATTGAATAATAGTGCTGTGTATGTGAATTTGCTAAATAGATTAAATACAGGTATATATACTTTAATTGTAAATGTAACAGATATAAATGTATCTTATACTATACATACAATTCTTAGTGAAGGTGGTAATAAAGAAGTATTTACTAAAAATGGAAATCAAGTTTTAAAATTAAATATGGATAATAATATAGATAAATTAAGAGTATATACAACAGATTCAAGTACTTTAGATATACAAATGGTATTGTTGGAGGGTGATTACACTAATACTGATATTTCTTACTTTGAAGGATTGCAAAGCGTTGGTCAAGGAGATAATATAAAACTTCTTAGTTATCAAGGGAAAAATCTATTTGATGGAACTTACCAAGATGGATATTTTGATGGAAATTCATTAGAGGAAGAACTTATACAAGGAATGCCTTGCATAACTACGAATTGGATTGAGTGTAGTCCTAATGTAGAATATTATTTCTTAGGTGGTAATAGAAAACAAATTCAATTTAAGAAAGGTGATAACATATTTAAATCAGTCATATTAAATTCAAATAATTTTGAAACTCCTACCGATTGCACTCATTTTAGATTGTATTATGCACGAACAGACCAGTTTTATTCTCAATTGAATATTTATAAAAAAGGTGATATAAAAATAATACCATATACATTAAGAGGTTTATCTAGTGAAATTAAGGATAGGATAATTTACAAAAATAATGGTCATAAATTAATACAAAGGTGTGAAGAAATAACTCTAAATGGGCAAGAAAATTGGATACAGCATGGAAATTCAAATGATAAGACATTAATATTCTATGCTAAAATTACAGAAGGAAGTTACAATAATTCAGATAATATAGAATTAAAATGTAATAGATTTAAAGGTATTAGAATAATTACAAATACTTTTACAGAAGAAGGTGTTTATGAAAATAGAGATGGAAATATTTATATAAGAATTTTAAGAAGCAGATTGGCAACACAAGATTTAACAGGGTTTAAAACATGGTTAAATAATAATAATGTAACTTTTATTAGACAATTAAAAGAAAATAAAGAAATTAAACTTGTAGATTTAGGGTTGAAAACTTTTGAAGGTGAAACTAGGTTTGTGACACAAATAGGAAATATTATACCAACTATAAATTTTGAAGTAACTCAAAACTTTGGTAGTAATATAGAAATTTTAAAAAATAAAATTAATACTTTAGAAAGTATGTGTACTTATAGTAAAACAATAGATTTATCAGGTAAGTTGATAAATGGATGGACTTTGTTTAGTGATGTTCATAGGAATTTAGTAATTACAAAGAATGGGAATATTGTAACTATTATTGGAAGTATTAAAGGTGGTACAACTTCTAACGGAACAGTTATATGCAAAATCCCAGATGGTATGATTCCTAAAGCTAACCAGCTATTCCAAGTTTTTAATACAATTGGAACATCTGTAGGACTGCTATATATAAATTCATATGGCGATTTTAAAGTAAATTCACTCACATCAAATACGGCTGTTATTATAAATGCACAATATATATTAGATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5d4aa34c8fe79458f48b5e42a17e9d595b37d79630c6ad5341424e43d2f55d1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank