Protein

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Genbank accession
UVK80398.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MSFEMSNEDQTVTVYDYSSDTGEYVGTREAYVVANTGLPAGCTDMEPPVAPENHVAIFRPESQVWILLEDHRGKVVYDKDTGLPLVITTIGSLPDNVTYIAPDGEHMKWNGNMWVNDPDAQHAKSVADATQHKTDLLNLADYKISILQDAVTYNLATDEESSMLDSWRKFRVLVNRINENDPQNIIWPESPE
Physico‐chemical
properties
protein length:192 AA
molecular weight: 21588,67650 Da
isoelectric point:4,37299
aromaticity:0,08333
hydropathy:-0,49167

Domains

Domains [InterPro]
DC_0192
STR
1–192
DC_0192
IPR051220
Unmapped
4–192
IPR051220
IPR003458
RBD
72–192
IPR003458
UVK80398.1
1 192
Architecture
STR
STR 1-192
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_PD328
[NCBI] 		2972468 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVK80398.1 [NCBI]
Genbank nucleotide accession
ON922918.1 [NCBI]
CDS location
range 1465 -> 2043
strand -
CDS
ATGTCTTTTGAAATGAGTAATGAAGACCAGACTGTAACCGTGTACGACTACTCCAGCGATACTGGCGAATATGTGGGAACCCGTGAAGCGTATGTAGTAGCCAACACAGGTCTTCCAGCAGGTTGCACAGACATGGAGCCTCCAGTGGCTCCAGAAAATCACGTGGCAATATTTAGACCAGAAAGTCAAGTATGGATCTTACTTGAAGACCACCGAGGGAAAGTTGTATATGATAAAGATACTGGACTTCCTTTAGTAATAACCACAATTGGGTCGCTTCCGGATAATGTAACTTATATCGCTCCCGATGGTGAACACATGAAGTGGAACGGCAATATGTGGGTAAACGATCCGGACGCACAACATGCTAAGTCGGTTGCAGATGCAACACAACACAAAACAGATCTTCTTAATTTAGCAGATTATAAAATCAGTATTTTACAAGATGCTGTAACTTATAATCTAGCTACTGACGAAGAAAGTTCAATGTTGGATTCGTGGAGAAAGTTTCGTGTACTTGTCAACCGCATAAATGAAAATGATCCACAGAATATTATCTGGCCTGAGTCTCCAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4501c26dd8d50006f087a0315c622ed50c9a5256b60c0c5280e03e542d729ef9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
complete genome sequence analysis of a novel Escherichia phage PD328 Zhuang,Y. 2013-12-26 — GenBank