Protein

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Genbank accession
AUR92110.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGLYLNGTNNYMTLSTLKMNDGDSVTIDFRWINDKTSGSDWALFDARWLYARIDGNTSQVSWPNSAGLHLDGCAQGDVFAVEHNERHQITFNVNESGWRDLYCFFMERGESMYLQAIIYSIDIQCAYSGNRFYDFSREHPLPTIEDDSGNGGNATLHGTINPTNFVPDDDAVSVVGQSAYAVLEPLPWVNVVGQSAYAVLRPPPAKQRKGVGIEFYAKAFRGRDIAMPPILTEGIAGQLLVNGNVHTGEMEPYINTSGFVEHGDSHAGIGTSRPNFNEYFLNTATKDTNIYFTQEITLTDKQIDLVSAGGVKADEVFWVSHIRTDSNTSNRDGQAQTTITFKDSNGDTISTAQGIWVKGKAYTTSWLTQHNIYEIPPNTVSMTYEIRSYNTTTWNLLGIGGNELRLDDGHLRDRELIVNGTFDTDFEGWVNDGTFSITSETTQDGVLPFDGAYATTAYAGSGSPTGLLTQDITITARELEYARSKGWRMEMGISGISRDEPYSDWDQCKFHLDFKDADGNVIKVAALTAIGADYWRHERLYPEIPEGTVSLSVRITSYSHKNWPQGGMDSVKLCIFKCSAQTNENP
Physico‐chemical
properties
protein length:586 AA
molecular weight: 65083,24540 Da
isoelectric point:4,76967
aromaticity:0,10922
hydropathy:-0,42218

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR92110.1
1 586
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0044
Central domain 11 235 226 0,5926
C-terminal 236 586 350 0,7270
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-235
C-terminal
236-586

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.169.O._10N.261.52.B1
[NCBI] 		1881213 No lineage information
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92110.1 [NCBI]
Genbank nucleotide accession
MG592536.1 [NCBI]
CDS location
range 67401 -> 69161
strand -
CDS
ATGGGGTTATATCTTAACGGCACAAACAACTACATGACGTTATCCACATTGAAAATGAATGATGGGGATAGCGTCACCATTGATTTTCGTTGGATTAACGATAAAACGTCAGGAAGCGATTGGGCATTATTTGATGCACGTTGGCTGTATGCTCGAATTGATGGGAACACAAGCCAAGTCAGTTGGCCTAACTCTGCGGGACTTCATTTAGATGGATGTGCGCAAGGGGATGTTTTTGCAGTTGAGCATAATGAACGGCATCAGATTACCTTTAATGTAAATGAAAGTGGGTGGCGTGACCTCTACTGCTTTTTTATGGAGCGTGGTGAGTCGATGTACCTCCAAGCTATCATTTACTCCATAGACATCCAGTGTGCATATAGTGGTAACAGGTTCTATGATTTTTCCCGTGAACACCCTTTGCCTACTATTGAAGATGATTCGGGCAATGGCGGAAATGCAACACTACATGGAACAATAAACCCCACCAACTTTGTACCTGATGATGATGCGGTATCTGTTGTAGGTCAGTCAGCCTATGCAGTGTTGGAACCGTTACCTTGGGTCAACGTAGTAGGGCAGTCAGCTTATGCGGTATTGCGTCCACCCCCTGCCAAGCAACGCAAAGGTGTAGGCATTGAGTTCTACGCTAAGGCGTTTAGGGGAAGGGATATAGCAATGCCACCAATCCTCACGGAAGGGATTGCAGGCCAACTGTTGGTAAATGGTAATGTGCACACTGGCGAAATGGAGCCCTACATAAATACTTCTGGCTTTGTGGAGCATGGCGATTCCCACGCAGGTATTGGAACCTCTAGGCCCAACTTCAATGAGTACTTCTTGAATACTGCCACGAAGGACACCAATATATACTTCACTCAAGAAATAACACTGACGGATAAGCAGATTGACTTAGTCTCAGCAGGAGGAGTGAAAGCCGATGAAGTATTCTGGGTTAGTCATATAAGGACGGACTCTAATACCTCTAACCGTGATGGACAAGCTCAGACAACTATAACATTCAAGGACTCTAACGGCGATACGATCTCTACCGCTCAAGGTATTTGGGTTAAAGGTAAAGCATATACGACGAGTTGGCTAACTCAACATAACATCTATGAGATTCCACCTAATACAGTATCTATGACTTATGAGATTCGTTCGTACAACACGACTACTTGGAACCTTCTAGGTATCGGTGGTAATGAATTGAGACTGGATGACGGGCATTTAAGGGATAGAGAATTAATAGTTAACGGGACATTCGATACCGACTTCGAAGGTTGGGTCAATGATGGAACATTCAGTATCACCTCAGAGACTACTCAAGATGGCGTATTACCATTTGATGGGGCTTACGCGACTACTGCCTATGCGGGGTCAGGATCACCTACGGGATTACTGACGCAAGATATAACAATCACTGCTAGAGAGTTAGAGTATGCTAGGTCGAAAGGTTGGCGCATGGAAATGGGTATTTCTGGCATTTCTAGGGACGAACCATATTCAGATTGGGATCAGTGTAAATTCCATTTGGATTTTAAAGATGCGGATGGGAATGTGATTAAGGTGGCGGCTCTGACTGCTATCGGTGCTGATTATTGGAGACATGAAAGATTGTATCCAGAAATACCTGAAGGAACTGTATCTTTAAGCGTTAGAATTACTTCATACAGTCATAAGAATTGGCCCCAAGGGGGAATGGATAGTGTTAAGTTGTGCATTTTCAAATGTAGCGCTCAGACGAATGAAAACCCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f056c360da561027881e9e3a3bf9007841b5f3f1beb17de0af1fcd4907b23f76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank