Protein

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UniProt accession
M1U3K4 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MTLTQINKAGLDEIALDHVFTIGASGSSAYTFQGEGLNGTVNNPTLYLTRGKTYRFENGSGGHPIRIQSTSGASGTAYNTGVTNNAGSGTVIVEVQHDAPDVLYYQCTSHAAMNGILYITGALADGGVTTAKIADDAVTTVKIAANAVGSSELADNAVDTAAIADDAVTSAKIADGTIVAANIANDTITAVQLANNSANINVIVDGAVSTAKIADDAVTTAKIANDAVDTGQIATNSVTTLKLVDESVTLAKLEHGTSSNDGKFLRANNGADPTFETVTSTTINNNADNRVITGSGTANTLNGESNVIIDSNGHLGVGGAPDFEFQVTDSSGAAVIRAKDGANNKTVDIIANSTGGLIRTLGSYPLVLNTNQTERMRIDSSGRVGIQGTPNSSNFGAKLQVRESGQAATTLTALFGANENASGTTGGISDNTAKACRIGIPHYDTDQKAAAMFVGYTGSGVNELYIGGGTGMMNAATSVRIYADSSSTINNGGNQIARFDSDGLKFGTDTAAANALDDYEEGTFTAYLQSYYDGTSGQVASSDATYTKIGRKVFVQIRWLNSNTNGLNSSGALIKIGGMPFAPDNNKKCITTDFATFNVDFQNTNARHVFETDSNGWYGQLNYSQGSWGRWAVSRWRTSAIYFIFLELTLPNNRPSYVYKLSLNLF
Physico‐chemical
properties
protein length:666 AA
molecular weight: 69465,53250 Da
isoelectric point:4,87345
aromaticity:0,07357
hydropathy:-0,18453

Domains

Domains [InterPro]
DC_0856
STR
2–339
DC_0856 DC_2088
IPR008972
STR
32–121
IPR008972
M1U3K4
1 666
Architecture
STR
RBD
STR 2-339 | RBD 380-630 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
M1U3K4
1 666
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1952
Central domain 11 250 241 0,0811
C-terminal 251 666 415 0,8653
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-250
C-terminal
251-666

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-GSP1
[NCBI] 		382262 Uroviricota > Caudoviricetes > Autographivirales > Lingvirus PGSP1 >
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54638.1 [NCBI]
Genbank nucleotide accession
HQ332140 [NCBI]
CDS location
range 22060 -> 24060
strand -
CDS
ATGACATTAACACAAATAAATAAGGCTGGTCTAGATGAGATAGCTCTGGATCATGTCTTTACAATAGGTGCTAGCGGTTCTAGTGCCTACACATTTCAAGGAGAAGGGTTGAATGGCACTGTCAACAACCCTACCCTTTACCTTACAAGAGGTAAAACGTATAGATTTGAAAATGGCTCAGGCGGTCATCCTATACGTATACAAAGCACATCTGGAGCAAGTGGTACTGCATACAACACTGGCGTAACTAACAACGCTGGTAGCGGTACAGTCATTGTTGAAGTACAACATGATGCACCTGATGTCTTATACTATCAGTGTACCAGTCATGCAGCCATGAACGGTATACTATACATTACTGGTGCACTTGCAGACGGTGGTGTAACTACAGCTAAAATTGCAGACGATGCTGTAACTACAGTTAAAATAGCAGCTAACGCTGTGGGGTCTAGCGAATTAGCGGACAACGCAGTTGATACAGCAGCAATAGCAGATGATGCAGTTACTTCAGCCAAAATTGCTGACGGAACTATTGTTGCAGCTAACATAGCCAATGATACTATTACAGCCGTTCAATTAGCTAATAACTCTGCAAACATAAACGTAATTGTAGATGGTGCAGTTTCTACAGCTAAGATTGCTGATGATGCAGTTACTACAGCCAAAATAGCTAATGACGCAGTAGATACAGGACAAATAGCTACCAACTCAGTTACAACTTTAAAACTTGTAGATGAATCAGTAACACTAGCTAAACTAGAACATGGCACATCATCTAACGATGGTAAGTTTTTACGTGCAAACAACGGAGCAGACCCTACGTTTGAAACTGTTACCAGTACAACAATAAACAACAACGCAGATAACAGAGTTATTACTGGCTCTGGTACTGCTAATACTTTAAATGGTGAGTCAAACGTAATTATAGATTCTAACGGACATTTAGGAGTAGGTGGCGCACCAGACTTTGAATTTCAAGTAACAGATTCTTCTGGTGCTGCTGTTATTAGAGCAAAAGACGGTGCTAATAATAAAACAGTTGACATAATTGCAAATAGCACAGGAGGTTTAATAAGAACTCTTGGTTCATATCCTTTAGTCCTTAATACAAATCAGACAGAACGTATGCGTATAGATTCGTCTGGAAGAGTTGGAATACAAGGAACTCCAAACAGTTCTAACTTTGGTGCAAAATTACAAGTACGAGAATCAGGTCAAGCTGCAACAACCTTAACAGCTTTATTTGGTGCTAACGAAAATGCTTCTGGTACAACAGGAGGAATTTCTGATAATACAGCCAAAGCCTGTCGCATAGGAATACCACATTATGATACCGACCAAAAAGCTGCTGCTATGTTTGTTGGTTATACAGGTAGTGGAGTAAATGAATTATATATTGGTGGTGGTACTGGTATGATGAATGCAGCAACATCAGTTCGTATATATGCTGATAGTTCTAGTACCATTAATAATGGTGGAAACCAAATAGCACGTTTTGATTCCGATGGATTAAAGTTTGGAACTGACACCGCAGCAGCCAACGCACTTGACGACTATGAAGAAGGAACTTTTACAGCTTATTTGCAAAGTTATTATGACGGCACATCTGGTCAAGTTGCTTCTAGTGACGCAACCTATACAAAAATAGGAAGAAAAGTTTTTGTACAAATAAGATGGCTTAATTCAAACACAAATGGATTAAATTCTAGTGGAGCTTTAATAAAAATTGGAGGTATGCCTTTTGCTCCTGATAATAATAAAAAATGTATAACAACTGATTTTGCTACTTTTAACGTAGATTTTCAGAATACTAACGCAAGACACGTATTTGAAACTGATTCAAATGGTTGGTATGGACAGTTAAATTATAGTCAGGGTAGTTGGGGTCGATGGGCTGTTAGTCGTTGGAGAACTTCTGCAATATATTTTATTTTTCTGGAACTTACATTGCCTAATAATAGACCGAGCTACGTCTATAAACTAAGCCTAAACCTGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f71d1012e981201fe2bb9fc4dbe20d6dd28dbe150741d598ab5f30309314a5b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6624
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50