Protein

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Genbank accession
YP_009855967.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAGFGQGFVQATILSENNAVKYRISASGSCTKSTVRPYIKVQDQPISILVRPGLNVYIFNTTTLTIEETKNYMFTNDASSSNEAFITYMDSLPPGKLAIFLSEGKLNTDDALVSWFKSRNSTAWPSKFDVTNFDAAYTAFYMTSKATITSEHVIFNDGVKNEPIEPLIDVVYDYYSDIGATGFPKRIFEFAEEARPTETGLAIIRLPTTELQTPLADYNLKSGDVVYFKLQLLIDTTDPSGIPTGTTRASVRFFNETALVSDTTIEANILNLGEWQLFERDITIPEGATSFTVYVSRQSTNDIAAARNLVMTETSRYRYPLMRSSEFGVNGIRNNVLMEDVPNDELLILKNTDADDRGIVRSAEFREV
Physico‐chemical
properties
protein length:368 AA
molecular weight: 41054,66540 Da
isoelectric point:4,69316
aromaticity:0,10598
hydropathy:-0,19348

Domains

Domains [InterPro]
DC_0912
STR
1–368
DC_0912
PS52031
LEC
18–187
PS52031
IPR039477
STR
53–113
IPR039477
YP_009855967.1
1 368
Architecture
STR
STR 1-368
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009855967.1
1 368
Domain Start End Length (AA) Confidence
N-terminal 1 153 153 0,5426
Central domain 154 357 205 0,5076
C-terminal 358 368 10 0,0896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-153
Central
154-357
C-terminal
358-368

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EclM_CIP9
[NCBI] 		2696340 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855967.1 [NCBI]
Genbank nucleotide accession
NC_048849 [NCBI]
CDS location
range 48335 -> 49441
strand +
CDS
ATGGCTGGCTTTGGACAGGGATTTGTCCAAGCCACTATTCTATCTGAAAATAATGCGGTGAAATACCGCATTAGTGCTTCTGGAAGTTGCACTAAAAGTACAGTTCGTCCTTACATAAAAGTTCAGGACCAGCCTATTTCTATATTAGTGCGTCCTGGACTTAATGTCTACATTTTTAATACAACAACTTTAACTATAGAAGAAACCAAAAATTATATGTTTACAAATGACGCTTCTTCTAGTAACGAAGCCTTTATAACATATATGGATTCTCTCCCACCAGGCAAATTAGCTATATTTTTGTCTGAAGGAAAGCTTAATACTGATGATGCTTTAGTTTCATGGTTTAAATCTAGAAACTCTACGGCTTGGCCTTCTAAGTTTGATGTCACTAATTTTGATGCGGCCTATACGGCGTTCTATATGACGTCTAAGGCAACTATCACATCAGAACATGTAATATTCAATGATGGGGTTAAAAATGAGCCTATAGAACCCCTGATTGACGTAGTGTATGATTATTACTCTGACATAGGAGCCACAGGGTTTCCTAAGAGAATATTTGAATTTGCCGAAGAAGCGAGACCGACTGAAACAGGTCTAGCAATAATTAGACTTCCTACTACTGAATTGCAGACACCATTGGCTGATTATAATCTTAAAAGTGGTGATGTTGTTTATTTTAAATTGCAACTTCTTATAGATACAACCGATCCGTCAGGAATCCCAACCGGAACTACTCGAGCATCGGTTAGATTTTTTAATGAAACTGCTTTAGTTAGTGATACTACTATAGAAGCCAACATATTAAATTTAGGCGAATGGCAATTGTTTGAAAGAGATATAACTATTCCTGAAGGAGCTACAAGCTTTACGGTATACGTATCTCGTCAGAGTACAAATGACATTGCTGCTGCCAGAAATTTAGTTATGACTGAAACTTCTAGATACCGCTATCCTTTGATGCGTTCATCGGAATTTGGTGTCAACGGTATCAGAAACAACGTATTGATGGAAGATGTTCCAAACGATGAGCTTCTTATTCTTAAAAATACAGATGCTGATGACCGTGGTATTGTCCGAAGTGCAGAGTTTCGTGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a527f56c94d2520d33bb6cbfd5f5df92ef956fcc89be05ecb3103304b8286779
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Enterobacter Phage vB_EclM_CIP9 Wang,K., Tamayo,M.G., Penner,T.V., Cook,B.W.M., Court,D.A. and Theriault,S.S. 2020 — GenBank