Protein

View in Explore
Genbank accession
YP_003969400.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALQPLRATAGLDAAGHRAINFGYPDKTKGGDGVNVDFFTYENTIQPHSPSRTYPKDFAVTYNDRIYISEVEITAPEPFNLNKWKATRVDPSWRVVTSTANLQGNVRQGEYILSQIVGANSVYTMPFDAANNIPAAGDTVVIKDNGFATHDYEIVVNGNGKKINNQATHRITLSGSTTVFIYNGTEWVAQLWAQGDSNRTYVSSTSYIPGENFFRAKVGDHLVRETQYGGGIRIRLPRYANHGDTIVTYDLDRLNPLTKTEFFVYPNSNHKILVGVGETPVDSAKFDSTGWGYFVFDARINQWRVFDADTKARWNMIESNYTAILGEKLAVHAANATDTITVTFPQEASNGDSFIIDTSYMVQGSKITVKIPDAQANDYIVPDENALGTPYVSKYRDIVKDLTKFTTKTETFTIDGRSHQWEFTYFRNALGTGLDVWVLISNTPMPFRVDRNDTSFVGLAAIATQVEVNKNKEQITTGQNRDCEAFVTPETLSNKVATQTNRGIARLATDAESKATSGTTEAWNSVIMTPERVNNRLATETMRGVLTVATQAQANAMSGTGEMWAQTAITPKVLDGRKSTETQTGITYQVIQAGAKQAERGTKGVGVHDFDEHYRYVTPKVLFEKVATETSQGMGFVATQPETDAGTDNHVNGPLLVTAKTLQGRQATTALTGLSRAVTDAEMSSNTPPTGDNIHVTPDAIVKRTANETRWGLAETATQAEVDAGTLHDRWFVTPKTFGVWLNGTRLTVDVSSGLTTAGTIWAGQSFNIVESTETQRGTLRTATQAETNTMINPLDNVMITPKKLNDRKASETLTGIIEIATKAESDAGTDATRAMTPIRVLDSMRTSANHRMNESRYGVGMMCVLANDASANTVWQGDDIQGSTRPVGQYATDNIVVSPRALNTALAHYLPLLGVAESSRSMDTADGTRVKADDWIRRTVAQTITGGMKFTESPVIERASVVRLDMIATGGKQDTAIMFRNSTNKNWWANGVHVIDGAYQVSTITDDVFDAKMSIFRTGDVQFYRNVSNGGQDPTADNHLARWRYNEDRYVRKTGNVTETITGLKTFQNDTTFSAGNGNAFSIKVGGAIALTGLYAGTDGALNIGSNKIALNIRPNGYTDPTNQTRFHPDGIVEASSQVRTKATAPVAANDLTRKDYVDNLIDDVTKSADSRVNKKGDNMTGELIITSPQAITANGDVTIKELLTVKRLRIEVGNGEFLEIRPNAVTRSVDFIWIS
Physico‐chemical
properties
protein length:1237 AA
molecular weight: 135292,33440 Da
isoelectric point:5,91628
aromaticity:0,07922
hydropathy:-0,39216

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage phiAS5
[NCBI] 		879630 Uroviricota > Caudoviricetes > Pantevenvirales > Chrysonvirus > Chrysonvirus as5
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003969400.1 [NCBI]
Genbank nucleotide accession
NC_014636 [NCBI]
CDS location
range 68405 -> 72118
strand +
CDS
ATGGCTTTACAACCGCTACGCGCTACGGCAGGATTGGATGCTGCCGGACATCGCGCTATTAACTTCGGCTACCCTGATAAAACTAAAGGCGGGGACGGCGTTAACGTTGATTTCTTCACCTACGAAAACACCATTCAGCCACATAGCCCAAGCAGAACATATCCAAAGGACTTTGCTGTAACATATAACGACCGCATCTATATTAGCGAAGTCGAAATTACAGCACCGGAGCCTTTCAATCTTAACAAATGGAAAGCGACTCGCGTTGACCCATCATGGCGAGTAGTTACATCGACTGCTAACTTGCAGGGTAACGTTCGTCAAGGTGAATACATTCTATCTCAGATTGTAGGCGCAAACTCAGTATACACTATGCCGTTCGATGCTGCAAACAATATTCCAGCAGCGGGCGATACCGTAGTTATCAAAGACAACGGATTCGCTACCCACGATTATGAAATCGTAGTAAACGGCAACGGCAAAAAAATCAACAATCAGGCAACACATCGCATCACACTATCTGGATCTACCACTGTATTCATTTACAATGGTACCGAGTGGGTTGCTCAGTTGTGGGCACAGGGAGATTCTAATCGAACTTATGTTAGTTCGACAAGCTATATTCCCGGTGAAAACTTCTTCCGTGCTAAGGTTGGCGATCATCTTGTCCGCGAAACTCAATACGGCGGTGGCATTCGTATTCGTCTTCCTCGTTATGCAAACCATGGCGATACCATTGTAACATACGATTTGGATAGATTGAATCCACTTACTAAAACTGAGTTTTTCGTTTACCCAAACAGTAACCATAAGATTCTAGTTGGCGTAGGCGAAACACCAGTTGACAGTGCCAAGTTTGATAGCACCGGTTGGGGTTATTTCGTGTTTGACGCGAGAATTAACCAGTGGCGCGTTTTTGATGCAGACACCAAAGCTCGTTGGAACATGATTGAATCCAATTATACAGCTATTCTTGGTGAAAAACTAGCGGTACACGCTGCAAATGCAACAGATACAATCACCGTAACGTTTCCTCAAGAAGCATCCAACGGCGATAGCTTTATCATCGATACAAGTTATATGGTACAAGGTTCTAAGATCACAGTCAAGATCCCGGACGCACAAGCTAACGATTATATCGTTCCAGACGAAAATGCACTTGGTACTCCATATGTTAGTAAGTATCGCGACATTGTTAAAGACCTGACTAAGTTTACAACAAAGACAGAGACTTTCACAATCGACGGTCGTTCCCATCAATGGGAATTCACTTACTTCCGAAATGCACTGGGAACTGGTCTTGATGTTTGGGTTTTGATCTCCAACACACCAATGCCATTCAGAGTTGATCGCAATGATACATCATTTGTTGGTCTAGCGGCAATCGCTACACAAGTAGAAGTAAACAAAAACAAAGAGCAAATTACAACTGGTCAAAATCGTGATTGCGAAGCATTTGTAACACCAGAAACCCTGAGTAACAAAGTCGCCACACAGACTAACCGTGGTATCGCTCGATTGGCAACTGATGCTGAATCAAAAGCAACAAGCGGTACAACCGAAGCTTGGAACAGTGTAATCATGACTCCGGAAAGAGTCAACAACAGATTGGCAACTGAGACCATGCGTGGTGTTTTGACTGTAGCAACACAAGCACAAGCTAACGCAATGAGTGGCACCGGTGAAATGTGGGCACAGACTGCAATCACTCCAAAAGTGCTGGATGGTCGCAAGTCAACCGAGACACAAACCGGTATTACTTACCAAGTTATTCAGGCTGGCGCAAAACAAGCAGAGCGTGGTACTAAAGGTGTAGGTGTTCATGATTTCGACGAGCATTACCGTTATGTAACACCAAAAGTTTTGTTCGAGAAGGTCGCTACCGAAACTTCTCAAGGTATGGGATTCGTCGCTACTCAACCAGAAACTGACGCTGGCACAGATAACCATGTTAATGGTCCGTTGCTCGTTACTGCTAAGACTCTGCAAGGACGTCAAGCTACGACAGCACTAACCGGTTTGTCAAGAGCTGTTACCGATGCGGAAATGAGTTCAAATACTCCTCCAACTGGCGATAACATTCATGTTACACCGGATGCGATTGTTAAGCGTACTGCAAACGAAACCCGCTGGGGTCTAGCAGAAACGGCAACACAGGCAGAAGTCGATGCTGGCACTTTGCATGATCGTTGGTTTGTAACTCCAAAAACATTCGGAGTATGGTTGAATGGTACACGGTTAACAGTTGATGTGTCAAGCGGTTTAACCACTGCTGGTACAATCTGGGCAGGACAGAGTTTTAATATCGTAGAATCAACCGAAACACAACGCGGAACATTGCGTACTGCAACACAAGCAGAAACAAACACAATGATTAATCCGCTTGATAACGTGATGATTACGCCTAAGAAATTGAACGACAGAAAAGCAAGTGAAACCCTGACTGGTATTATTGAGATCGCGACTAAGGCAGAATCCGACGCTGGCACAGATGCAACTCGCGCAATGACTCCAATTCGTGTTCTTGATTCTATGCGCACAAGCGCGAACCACAGAATGAATGAATCTCGTTATGGCGTTGGTATGATGTGTGTTCTGGCAAATGATGCAAGCGCGAATACAGTGTGGCAAGGTGATGATATTCAAGGATCAACTCGCCCAGTTGGTCAATATGCAACGGATAATATCGTTGTTAGTCCACGAGCACTGAATACCGCATTAGCTCATTATTTGCCCCTTCTAGGTGTTGCCGAAAGTTCACGTTCTATGGATACAGCAGACGGCACAAGAGTTAAAGCCGATGATTGGATTCGTCGTACAGTTGCACAGACTATTACCGGTGGTATGAAGTTTACCGAATCTCCAGTTATTGAACGTGCAAGCGTTGTTAGACTTGATATGATTGCAACTGGTGGCAAACAAGATACCGCAATTATGTTCAGAAACAGCACCAATAAAAATTGGTGGGCAAACGGCGTTCATGTTATTGACGGTGCTTATCAGGTCAGCACTATTACCGATGATGTATTCGACGCGAAAATGAGTATTTTCAGAACAGGCGATGTTCAGTTCTATAGAAACGTTTCAAACGGTGGACAAGATCCTACCGCTGATAATCATTTGGCACGTTGGAGATATAACGAAGATCGTTATGTTCGCAAGACTGGAAACGTCACTGAGACTATTACCGGATTGAAAACATTCCAGAATGATACAACATTCAGTGCTGGTAACGGCAATGCGTTCAGTATTAAAGTTGGCGGTGCAATTGCATTAACTGGTTTGTATGCTGGAACTGATGGTGCTCTTAACATCGGTTCAAACAAAATCGCATTGAACATTAGACCGAATGGGTATACAGACCCAACAAACCAGACACGATTCCATCCTGATGGTATTGTTGAGGCATCCAGTCAAGTTAGAACTAAAGCAACCGCACCGGTCGCAGCTAACGATTTAACCCGCAAGGATTACGTCGATAACTTGATTGATGATGTTACTAAGTCTGCCGATAGTCGTGTAAATAAGAAAGGTGACAACATGACTGGCGAATTGATTATTACATCCCCACAAGCTATTACTGCAAATGGTGATGTGACAATCAAGGAACTGCTAACAGTTAAGCGTCTGAGAATTGAAGTCGGTAACGGTGAGTTCTTGGAAATTAGACCTAACGCAGTAACCAGATCTGTTGATTTTATTTGGATTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f3d845024e2abe861bbb31b29f6c0df424024b0a5d45172e69696382ddbe297
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage phiAS4 and phiAS5 infecting Aeromonas salmonicida Kim,J.H., Son,J.S., Choi,Y.J., Kim,K.S. and Park,S.C. 2011-11-25 — GenBank