Protein

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Genbank accession
YP_010303234.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,62
Protein sequence
MKYSLFAASAVPQLTRLFAQATADDKSCYLVRLNNGFTETDINKCLNYQTQTGAGYSFDAALAASSGICTVLAKGTNCVRTIDRQKISVSDCLLTAVAEGVPTHLILGGILPVCLTVGTDVTLLYPDLNIKYDAAGYKTQITINSFTIPLTNMWVENTTATWLGGSEVVALDSSLWTPGATSFADYLGATATVSGNAKAPADGAAGIDLGTTGVMSLTSNIDLSQSFTIEFDYRQSSTTDYSEFTLLKMGTTLTDRLTLSFDRSNEKGFLLWNNSGGGAAAAKVVRPIAAYAAMKTTSNVHIKYVYNALSNIHTISINGTVVDSFTYAIVKPNVTGSIVTGGYGSSANAAYTPIIDKYSIRQGV
Physico‐chemical
properties
protein length:364 AA
molecular weight: 38534,10960 Da
isoelectric point:5,62555
aromaticity:0,09066
hydropathy:0,13544

Domains

Domains [InterPro]
DC_0447
STR
1–175
DC_0447 IPR013320
IPR013320
STR
188–358
IPR013320
YP_010303234.1
1 364
Architecture
STR
STR 1-358 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010303234.1
1 364
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,0003
Central domain 249 353 106 0,0542
C-terminal 354 364 10 0,9580
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-353
C-terminal
354-364

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_7
[NCBI] 		2866695 Uroviricota > Caudoviricetes > Snuvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010303234.1 [NCBI]
Genbank nucleotide accession
NC_061451 [NCBI]
CDS location
range 54448 -> 55542
strand -
CDS
ATGAAATACAGTTTATTTGCAGCATCTGCCGTACCTCAGCTTACTCGTCTGTTTGCTCAGGCTACCGCCGACGATAAGTCCTGTTATCTCGTTCGTCTCAACAACGGATTCACTGAGACAGACATTAATAAGTGCCTTAACTATCAGACACAGACTGGTGCAGGTTACTCGTTTGATGCAGCACTAGCAGCGTCTAGCGGTATCTGTACTGTGCTGGCTAAAGGCACCAACTGCGTTCGCACTATCGACCGTCAGAAGATTTCCGTATCTGATTGCCTGTTGACCGCAGTTGCAGAAGGCGTGCCTACTCATCTTATTCTGGGTGGCATCTTGCCTGTGTGTCTGACTGTAGGCACGGACGTTACTCTGCTTTATCCTGACCTGAACATCAAGTACGATGCAGCGGGATATAAGACGCAGATTACGATCAACAGCTTCACTATTCCACTGACCAACATGTGGGTAGAGAACACAACAGCGACATGGCTTGGCGGTTCAGAGGTTGTAGCTCTGGACAGTTCGTTGTGGACGCCTGGCGCCACCAGCTTTGCTGACTATCTTGGAGCCACTGCGACTGTAAGTGGTAACGCTAAAGCTCCTGCTGACGGTGCTGCTGGTATCGATTTAGGCACGACAGGCGTTATGTCTCTCACGTCCAATATCGATCTGAGTCAGTCATTCACCATTGAGTTTGATTATCGTCAGTCAAGCACTACGGACTACTCTGAGTTCACGCTGCTCAAGATGGGCACCACGTTAACTGACAGACTGACGCTATCGTTTGACCGTTCGAACGAGAAAGGCTTCCTGTTGTGGAACAACTCAGGTGGCGGTGCGGCTGCTGCTAAAGTGGTTCGTCCTATTGCTGCATATGCCGCGATGAAAACCACCAGCAACGTCCACATCAAGTATGTGTATAACGCACTGTCAAACATCCATACTATTTCCATCAACGGTACTGTTGTGGATAGCTTCACGTATGCGATTGTTAAGCCGAATGTTACTGGAAGTATCGTTACAGGCGGTTATGGTTCAAGTGCGAATGCGGCCTACACGCCTATCATTGACAAATACAGCATTCGCCAAGGAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f783c7e1efb5aa63fcc7538991121fd0c48711e10369c2dc9ff6091a6a3aab0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5609
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_7 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank