Protein

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Genbank accession
WNM52999.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MILRLFLDFPVELGQEFRYKTVENFKRIVNAHGRLVDDLEYHRKEEKHAHDAKQIDYTTNYSRSVSDALDKQNNRINNLVVGANGDAMAEVKDSRVALDGTISELLSQRLDYDFGKLNKKIDDNFKYLNDKIERIVNVNDYGADPTGQKDSTLAFQKAFGEGHRHVHMTEGTYIISGVKMPNYTILSGEGKGITYLRIADDAPAETIGITNLNMDGTAEYIGVDNFTIDGNRTRQGNTLSPAGGSRSSNIRFAGVKHGFAYSVESFSSLLHGIDVTYSSDDYFYQGDGIRVKEALESKYIHIQECETYDFGDDGITTHHSRYLILQNNYSHDPVKDSGNHNGIEVDDGSQHVFVMGNKTEKCFGGLEIKAHESTSAASDVVVSDHLDIKSIRSYNIRHIGHHRAGDVQSKTAYNIMLNNCTSLYPQYNGSYENTTPRAMVICAYRNVVVNNFTAIGDGNFMANMPVIAVQFRAENVMLNNINVSGFKNSLADVKVFGGANRPKKVSLSNINIVNSSNNRGIAGGGKIYDLRIINANLQGNGTGNGVELYNNTAEIVGVSAENYKRPAMIAGKEYFYMPTSLKGGFSGGAQVVQLLLKEVLLLPLLVVPLLIVTVLLL
Physico‐chemical
properties
protein length:617 AA
molecular weight: 68165,74200 Da
isoelectric point:6,13824
aromaticity:0,08590
hydropathy:-0,33679

Domains

Domains [InterPro]
DC_0125
ATT
1–215
DC_0125 DC_0616
IPR012334
STR
118–579
IPR012334
IPR011050
STR
133–517
IPR011050
IPR024535
ENZ
135–366
IPR024535
WNM52999.1
1 617
Architecture
ATT
STR
ATT 1-215 | STR 216-602 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNM52999.1
1 617
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,9907
Central domain 151 593 444 0,9815
C-terminal 594 617 23 0,0285
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-593
C-terminal
594-617

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S-CoN_Ph10
[NCBI] 		3076566 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM52999.1 [NCBI]
Genbank nucleotide accession
OR354833 [NCBI]
CDS location
range 55248 -> 57101
strand -
CDS
ATGATTTTGAGATTATTTTTAGATTTCCCTGTTGAATTAGGGCAAGAATTTAGATATAAAACAGTAGAAAATTTTAAAAGAATTGTTAATGCTCATGGGCGCTTAGTTGATGATTTAGAATACCATAGAAAAGAAGAGAAACACGCACATGATGCTAAACAAATTGATTACACAACAAATTATTCAAGAAGTGTTAGTGATGCATTAGATAAACAGAACAATAGAATCAATAATCTAGTAGTCGGTGCAAATGGAGATGCTATGGCAGAGGTTAAAGATAGCCGAGTTGCATTAGACGGAACAATAAGTGAATTACTTTCACAAAGACTAGATTATGATTTTGGTAAATTGAATAAAAAAATTGATGATAATTTTAAGTATCTTAACGACAAAATTGAACGTATTGTTAATGTTAACGATTATGGTGCTGACCCTACAGGTCAAAAAGATTCAACATTAGCATTCCAAAAAGCATTTGGAGAAGGTCATAGACATGTTCATATGACAGAAGGTACTTATATTATATCTGGTGTTAAAATGCCTAACTATACGATTTTAAGTGGGGAAGGTAAAGGAATAACATATTTAAGGATTGCAGATGATGCGCCAGCTGAAACAATTGGTATAACTAACTTAAATATGGATGGAACAGCTGAATATATTGGTGTTGATAATTTCACAATTGACGGAAATAGAACAAGACAAGGGAATACGTTATCTCCAGCTGGTGGTTCACGTTCAAGTAACATTAGATTTGCTGGTGTTAAGCATGGCTTTGCATATTCTGTAGAATCATTTAGTAGTTTATTACATGGTATTGATGTAACGTACTCTAGTGATGATTATTTTTATCAAGGAGACGGAATCAGAGTAAAAGAAGCATTAGAAAGTAAATATATTCATATACAAGAATGTGAAACTTATGATTTCGGAGACGATGGTATTACTACTCATCATAGTAGATACTTAATTCTACAAAACAACTATTCACACGACCCAGTAAAAGATAGTGGGAACCATAACGGTATTGAAGTAGACGATGGTTCACAACATGTGTTTGTTATGGGGAATAAAACAGAAAAATGTTTTGGCGGTTTAGAGATTAAAGCGCATGAATCTACAAGCGCAGCAAGTGATGTTGTTGTAAGTGACCATCTTGATATTAAAAGTATTCGTTCTTATAATATTCGTCATATAGGACATCATAGAGCCGGAGATGTACAATCTAAAACAGCTTATAATATTATGTTGAATAACTGTACTTCATTATATCCTCAATACAATGGTTCATATGAGAACACAACACCAAGAGCAATGGTTATTTGTGCTTACAGAAATGTAGTTGTTAATAACTTTACAGCTATTGGCGATGGCAACTTTATGGCAAATATGCCAGTTATTGCTGTTCAATTCAGAGCAGAAAACGTTATGCTTAACAATATTAATGTAAGTGGTTTCAAAAATTCATTAGCTGATGTTAAAGTATTTGGTGGAGCAAATAGACCTAAAAAAGTATCATTATCTAATATCAATATTGTTAATTCATCTAACAATAGAGGTATTGCAGGTGGTGGAAAAATTTATGATTTAAGAATTATAAATGCTAACTTGCAAGGTAATGGTACAGGAAATGGTGTTGAATTATATAATAACACAGCTGAAATTGTTGGAGTAAGTGCTGAGAATTATAAGAGACCAGCGATGATTGCTGGTAAAGAATACTTTTATATGCCAACGAGTCTTAAAGGAGGGTTCAGTGGGGGAGCACAGGTGGTGCAGCTATTGCTGAAAGAAGTGCTGTTATTGCCTCTACTGGTGGTTCCTTTGCTCATAGTAACCGTTCTTTTGTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
cb0b398132652d2efddb6f08561c385b9217e91f581a83fb805d7ff1ac39fce4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50