Phage RBP Database

Genbank accession

YP_009816014.1 [GenBank]

Protein name

baseplate wedge tail fiber protein connector

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect2

Probability 0,94

Protein sequence

MSKQIIGIGASANDNTGDTLRAGGDKINDNFNEVYGAIGNGTDVQLSVSGPTLNQVLKYTSNNRFEPGNLDTLTAALNVNGNEIISASNGNIILNPNGTGDVNISHGSVTSVFDGATGVIDFPTKIQYKNQYATLSSAPAIANYKGYFFTVDGDDSPYVNINITAGGVGDTRAKILTQYSSVDALLDVDTTTTAPTNNQVLKWNASSSKWLPGDDAAGIASINLFATVTADTGSTTANTQTDTLTIAGGADIVTSVVGDTVTVAFNGTIPTTFAAMTDTDMSSGAQFGTPTQGDSLFWNGSDWIVTRSPITWWEINANGSSDFTFQGPGFPSTANDPTLYVNRGFTYAFDNSVQGGAHPFRIQSTQGLAGNPYTAGQSGSGSNVLYWTVPMDAPSTLYYQCTIHAAMQGTINVIS

Physico‐chemical properties

protein length:	415 AA
molecular weight:	43367,92760 Da
isoelectric point:	4,15518
aromaticity:	0,09157
hydropathy:	-0,16627

Domain architecture

YP_009816014.1

1 415 aa

ATT 1–103 · STR 332–413 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR036240
STR

IPR036240 IPR008972

IPR008987
ATT

IPR008987 IPR008972

G3DSA:1.20.5.960
Unmapped

G3DSA:1.20.5.960

YP_009816014.1

1415 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0210
STR

DC_0210

YP_009816014.1

1415 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	44	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	3	103	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	13	41	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR008972	STR	IPR008972	332	413	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits
IPR008972	STR	IPR008972	337	413	Merged direct domain	Cupredoxin	Central	Low	Positional only	3 proteins / 3 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-P4 [NCBI] · taxon 2484640

Uroviricota Caudoviricetes Pantevenvirales Leucotheavirus Leucotheavirus sp4

Host

Synechococcus sp. WH 7803 [NCBI] · taxon 32051

Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Genbank protein accession

YP_009816014.1 [NCBI]

Genbank nucleotide accession

NC_048102 [NCBI]

CDS location

range 39560 -> 40807
strand +

CDS

ATGTCTAAGCAAATTATTGGTATTGGCGCTTCCGCTAATGATAACACGGGGGATACCCTCCGTGCGGGCGGTGATAAGATTAATGATAACTTTAATGAAGTATATGGTGCGATTGGAAATGGAACCGACGTTCAACTGAGCGTTTCTGGTCCAACTCTCAATCAAGTATTGAAATATACGTCAAATAACAGGTTTGAACCTGGTAATCTTGACACTCTTACCGCCGCTCTAAATGTCAACGGAAACGAGATTATCTCGGCGTCGAATGGCAATATTATTTTAAATCCCAATGGAACTGGAGATGTAAACATTTCTCATGGAAGTGTTACCAGTGTCTTTGATGGTGCTACTGGTGTTATTGATTTTCCTACGAAAATTCAATACAAAAACCAATATGCAACATTAAGTTCTGCTCCTGCCATTGCTAATTACAAAGGTTATTTCTTCACTGTTGATGGTGACGATAGTCCTTATGTAAATATTAATATCACTGCTGGCGGTGTTGGAGACACTAGAGCAAAGATATTGACTCAATATTCTAGTGTTGATGCTTTGTTGGATGTAGATACAACAACCACTGCTCCTACAAATAACCAGGTTCTGAAGTGGAATGCTTCTAGCAGCAAATGGTTACCTGGAGATGATGCTGCTGGTATTGCAAGCATTAACTTGTTTGCTACTGTAACCGCAGATACTGGTAGTACAACAGCAAATACTCAGACTGATACTCTGACGATTGCTGGTGGTGCTGACATCGTTACTAGTGTTGTTGGTGATACAGTTACTGTTGCATTTAATGGAACTATTCCAACTACATTTGCAGCAATGACTGACACTGACATGTCAAGTGGTGCTCAGTTTGGTACTCCTACTCAAGGAGATTCATTATTCTGGAATGGTAGCGATTGGATTGTTACTCGTAGTCCTATTACTTGGTGGGAAATTAATGCAAACGGATCTTCCGATTTCACTTTCCAAGGACCAGGATTCCCTTCAACCGCTAATGATCCTACCTTATATGTGAATAGAGGATTTACTTACGCTTTTGATAACAGCGTACAAGGTGGTGCTCATCCATTCAGAATTCAAAGCACTCAAGGTTTAGCAGGTAATCCATATACTGCTGGTCAAAGTGGTAGTGGTAGTAACGTTCTCTATTGGACTGTTCCAATGGACGCTCCTAGCACATTGTATTATCAATGTACAATCCATGCTGCAATGCAGGGAACTATTAACGTTATTAGTTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)