Protein

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Genbank accession
AGH15996.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTFSVNDLLVGPVVPAAGVTLISIDFYFEAAAHLEVYISGSNTPLTLGVDYMVTLPSAVNATDGAITLTTAADGVASYAIYGKQPLERQADIQFRGDFRAEVINLEFDRIWRAISGIDTDLERVSLFSRTSDIPNPLETSSDATRIGKSIGFTPDGSGLALVTNADGAITVPPSSVDNAVVRWDGTAAGSIQSSPVTIDDAGAIFAAGLTLEASSSSLFFIDSDTGVQTRVFIDNSGTLVFDVDRNNAVGGSLWVVDIDDVRRLYMDTSGNLRVGDGTAPSVSFEVAGTDAILVPSGTTAQRPAGTTAGRLRYNSQLDMFEAYTTAAGWSGFGTEIGAVAEDVLPATDATYDLGSGSFRFVDAWFSGTVRAANYSDGASNVPASALIDGTAKAFFAYDQTAPNADKSYNISSTTDQAAGLFTWAYTSNFNDAVYAMVSATGSETGQVTGSLQGRGTTNAKATSGWGASTFDNSSALADRDGNGAAFFGDLA
Physico‐chemical
properties
protein length:491 AA
molecular weight: 51055,40410 Da
isoelectric point:4,09772
aromaticity:0,09572
hydropathy:0,03564

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Dunaliella viridis virus SI2
[NCBI] 		754069 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Dunaliella viridis
[NCBI] 		140095 Eukaryota > Viridiplantae > Chlorophyta > Chlorophyceae > Chlamydomonadales > Dunaliellaceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH15996.1 [NCBI]
Genbank nucleotide accession
HQ332136 [NCBI]
CDS location
range 13974 -> 15449
strand +
CDS
ATGACGTTTTCCGTAAATGATCTTTTGGTTGGTCCGGTGGTGCCGGCCGCCGGTGTGACGCTGATCTCGATCGATTTCTACTTCGAGGCGGCTGCGCATCTTGAGGTGTATATCTCCGGGTCCAACACGCCCCTGACGCTGGGCGTGGATTACATGGTGACCCTGCCGTCCGCGGTCAACGCAACCGATGGCGCGATCACGCTGACGACCGCGGCTGACGGCGTGGCGAGCTATGCGATCTATGGAAAGCAGCCGCTGGAGCGGCAGGCGGATATTCAGTTTCGCGGCGATTTTCGCGCCGAGGTCATCAATCTCGAATTTGATCGGATCTGGCGGGCCATCTCGGGTATCGATACGGATCTTGAGCGCGTCAGTCTCTTCTCGCGCACCTCGGACATTCCCAATCCTCTCGAAACCTCCAGCGATGCAACGCGCATCGGAAAATCCATCGGCTTTACCCCGGATGGGTCCGGCCTCGCCCTGGTTACGAATGCGGATGGCGCAATCACCGTGCCCCCGTCCAGCGTCGATAATGCGGTGGTGCGCTGGGATGGCACGGCCGCCGGGTCAATTCAGAGTTCGCCGGTGACCATCGACGACGCCGGCGCAATTTTCGCGGCCGGCCTGACGCTTGAGGCGAGCTCGTCCTCTCTCTTCTTTATCGACAGCGATACGGGGGTGCAAACCCGTGTGTTTATTGATAACTCCGGAACGCTGGTTTTCGATGTAGACCGGAACAATGCAGTCGGTGGCTCGCTCTGGGTGGTCGATATTGATGACGTTCGCCGTCTCTACATGGACACATCCGGCAATCTGCGCGTCGGCGACGGTACGGCGCCGAGCGTGAGCTTTGAGGTGGCCGGGACCGACGCTATTCTGGTGCCATCGGGTACGACTGCGCAGCGGCCCGCTGGCACGACCGCCGGGCGGCTTCGCTACAACAGCCAGCTCGACATGTTCGAGGCGTATACGACTGCCGCGGGATGGTCCGGCTTCGGGACTGAGATCGGCGCCGTGGCCGAGGATGTTCTGCCCGCGACCGACGCGACATACGATCTCGGTTCTGGGTCGTTCCGGTTTGTCGACGCATGGTTCTCAGGCACTGTCCGCGCGGCGAATTATAGCGACGGGGCAAGCAACGTGCCCGCATCGGCTTTGATCGACGGAACCGCGAAAGCGTTCTTTGCCTACGATCAGACAGCGCCAAATGCCGACAAAAGCTACAACATATCCAGCACCACAGATCAAGCTGCCGGGCTTTTTACGTGGGCGTACACCTCGAATTTCAACGATGCGGTTTATGCTATGGTGTCTGCCACGGGGTCAGAGACCGGTCAGGTGACGGGCAGTTTGCAGGGTCGCGGGACTACCAATGCAAAGGCGACAAGCGGATGGGGGGCTTCTACGTTCGACAACTCATCCGCATTGGCTGATCGTGACGGCAATGGCGCGGCGTTTTTTGGCGATCTCGCATGA

Tertiary structure

PDB ID
e3f14bc37a2fe4756fad23045dfccf3f3c6798ca1aa10167787a0bbe5c7ccec8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Dunaliella viridis virus SI2 Henn,M.R., Stepanova,O., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2012-02-15 — GenBank