Protein

View in Explore
Genbank accession
CAB4123036.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TSP
Evidence DepoScope
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MVVQIQFRRGLAIDWYNTNPTLASGEPGYETDTGKYKIGDNVTTWRLLPYAAGGATGPTGASGTNGSTGSTGPTGAQGTQGAGSAISGIWHNRNTHPDGSNGWLLINGGGGDTANMTDLTAIQMNRYANDGSDWGAFFGDVLYPARLTNTVNFQITDTTDPTVFGSYIANMSNDTNYSGGWFYFASLTAVAGNGAFVNNRTYTLSWTLNGVDGATGSTGPTGPTGETGPTGPTGATGSTGPTGATGATGSTGPTGATGATGSTGPTGTTGATGSTGPTGTTGATGSTGPTGATGATGATGPTGATGPTGAASTVTGPTGPTGATGPTGPVSTYAYAINISATTTNATFYPMLANVATGNTADFSSTGLTFNPNSNVLTAGAFVPTSGTAPYAGMFLAATNAVAFSTGGGGERLRIDQNGNVGIGSTLPVYKLDVSGTTRVSTVSNNPTLILQGNANVSMTMRMVSDGSLSFENTTGQVFSVGNNQTSGTIFSVNDISGLPSIMVMANGNIALAPYGGNVGIGTQNPVYTLDVQGSGRFTTNLVVNGQTNLGSVGNVVITGGANTHVLSTNGLGLLSWVAPGSGPTGVTGPTGSTGATGSTGPTGVTGPTGSTGATGVTGPTGVTGPTGSTGATGVTGPTGSTGSTGITGPIGATGVTGPQGSSVSIFFYKADALSQAGNPAAGYLQWDNSAQITSNNIYLNTLTQDGIDIGTILSLLVPGQQIIIQDKNDGTNYQKWTLSSSPTDGAGVWTFPVTPAGSAGTGASNFADGHELFVSLVLTGPQGATGPTGSTGATGPSGFTGATGVTGPTGSTGATGVTGPTGATGLQGSTGATGVTGPTGSTGATGVTGPTGSTGATGVTGPTGSTGATGVTGPTGATGPTGQASTVTGPTGPTGATGVTGPTGASGTNGATGPQGATGASAGSTDGNILVVNSNANFTFYPTFVNNTSGNLAVTTDSDLSYNPSSNTLTVGTLLAISKSFVIDHPTLPGMKLRYASLEGPENGVYVRGRLEGHNIIDLPFYWPDLVDVSTITVHVTPIGMYQQLYVKSITSNTVVIENNSGAMLTNCFYTVYAERRDIEKLQTEYPA
Physico‐chemical
properties
protein length:1089 AA
molecular weight: 106764,22550 Da
isoelectric point:4,54998
aromaticity:0,06703
hydropathy:-0,10973

Domains

Domains [InterPro]
SSF69349
4–112
SSF69349 IPR008160 IPR050149
IPR041352
5–40
IPR041352 IPR008160 IPR008160
CAB4123036.1
1 1089
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4123036.1 [NCBI]
Genbank nucleotide accession
LR796167 [NCBI]
CDS location
range 173992 -> 177261
strand +
CDS
ATGGTAGTTCAAATTCAATTCCGCAGAGGATTGGCGATTGATTGGTATAACACCAATCCCACCCTGGCGAGCGGAGAGCCTGGATATGAAACCGACACCGGCAAATACAAAATCGGCGACAATGTCACAACATGGAGATTGTTGCCATATGCTGCCGGTGGCGCCACAGGTCCCACAGGTGCAAGCGGAACTAATGGATCCACAGGATCTACCGGCCCCACTGGAGCACAAGGCACTCAAGGCGCTGGCAGTGCAATATCGGGAATTTGGCACAATAGAAATACTCATCCTGACGGCTCAAACGGCTGGTTACTGATCAATGGGGGCGGGGGCGACACTGCCAACATGACTGATCTCACTGCCATTCAAATGAATCGTTATGCGAATGACGGCAGCGACTGGGGTGCATTCTTTGGCGACGTGTTATATCCAGCTCGTCTAACCAACACTGTGAATTTTCAAATCACAGACACCACTGATCCCACAGTGTTTGGTTCATATATTGCCAACATGTCCAACGACACTAACTATAGCGGCGGGTGGTTTTACTTTGCCAGCTTGACTGCCGTTGCTGGAAATGGTGCGTTTGTAAATAACAGAACTTACACTTTGTCTTGGACTTTAAATGGAGTGGACGGTGCAACGGGATCCACAGGACCCACGGGTCCAACCGGTGAGACTGGTCCAACTGGTCCAACTGGTGCAACGGGATCCACAGGACCCACGGGCGCTACAGGTGCAACGGGATCTACGGGTCCAACGGGTGCGACAGGCGCAACGGGATCTACGGGACCAACTGGCACCACAGGCGCAACGGGATCTACAGGTCCAACTGGCACCACAGGCGCAACGGGATCTACAGGTCCCACTGGTGCGACGGGTGCAACTGGAGCAACAGGTCCCACTGGTGCTACTGGCCCAACAGGTGCTGCAAGCACAGTGACAGGTCCCACAGGCCCAACTGGAGCAACAGGTCCCACAGGACCAGTCAGCACTTACGCTTATGCCATTAATATCTCAGCAACCACTACCAATGCTACGTTTTACCCCATGTTGGCAAATGTAGCAACAGGAAACACAGCAGATTTCAGCAGCACAGGACTGACATTTAATCCCAACAGTAATGTGCTCACCGCCGGAGCATTTGTTCCCACATCAGGAACCGCCCCATATGCCGGCATGTTCCTAGCTGCCACAAATGCTGTGGCATTTAGCACTGGTGGCGGTGGTGAGCGATTGCGTATTGATCAAAACGGCAACGTGGGTATTGGTTCTACCTTGCCAGTTTACAAACTAGATGTATCTGGCACTACTCGTGTGTCCACTGTTTCCAATAATCCCACATTGATACTACAAGGAAATGCCAACGTATCAATGACAATGCGCATGGTAAGCGATGGATCATTGAGTTTTGAAAACACAACTGGCCAAGTATTCAGTGTAGGTAACAATCAAACTTCTGGCACAATCTTCAGCGTAAATGACATCTCGGGGCTGCCCAGCATCATGGTGATGGCAAATGGAAATATTGCCTTGGCTCCGTATGGGGGAAATGTAGGAATTGGCACACAGAACCCGGTTTACACGTTAGATGTTCAGGGATCAGGTAGGTTCACAACTAACTTAGTTGTAAATGGACAAACAAACTTGGGTTCTGTGGGTAATGTTGTAATAACAGGCGGGGCAAACACCCATGTCTTAAGTACAAACGGATTGGGACTTTTAAGCTGGGTGGCACCAGGATCAGGTCCCACAGGCGTTACTGGCCCAACAGGCTCTACTGGCGCAACTGGTTCCACAGGTCCAACAGGTGTAACAGGACCAACTGGATCTACTGGTGCCACTGGGGTAACAGGACCAACTGGTGTAACAGGACCAACTGGATCTACTGGTGCCACTGGGGTAACAGGACCAACTGGATCAACTGGATCAACCGGAATTACTGGTCCTATTGGAGCAACTGGCGTAACAGGACCACAAGGTTCATCAGTCAGCATCTTTTTTTATAAAGCTGATGCACTAAGTCAAGCTGGAAATCCTGCGGCTGGGTATCTCCAATGGGACAATTCTGCACAGATAACCAGCAATAACATTTATCTCAATACATTGACTCAAGATGGGATTGATATTGGCACTATTTTGAGTTTACTTGTTCCTGGTCAACAAATCATTATACAAGACAAGAACGACGGTACCAATTATCAAAAATGGACATTATCAAGTTCTCCCACTGACGGGGCCGGAGTCTGGACATTTCCTGTCACACCTGCAGGATCTGCAGGAACCGGAGCCAGCAATTTCGCCGACGGGCATGAGTTGTTTGTATCACTTGTTTTGACTGGGCCACAAGGGGCAACAGGACCCACAGGATCTACTGGTGCCACAGGCCCATCTGGATTCACTGGTGCCACAGGCGTAACAGGACCAACTGGATCTACTGGTGCCACAGGCGTAACAGGTCCCACAGGTGCCACAGGCCTACAAGGTTCCACGGGTGCCACAGGCGTAACAGGACCAACTGGATCTACTGGTGCCACAGGCGTAACAGGACCAACTGGATCTACTGGTGCCACAGGCGTAACAGGTCCCACAGGATCTACTGGTGCCACAGGCGTAACAGGTCCCACAGGTGCCACAGGACCAACTGGTCAAGCAAGCACAGTAACAGGCCCAACAGGTCCCACAGGTGCCACAGGCGTAACGGGACCCACTGGAGCAAGTGGAACCAACGGCGCTACTGGCCCACAAGGTGCTACTGGAGCGTCGGCTGGAAGCACAGACGGCAACATTCTTGTTGTCAATAGCAACGCCAACTTCACGTTCTATCCCACATTTGTCAACAATACGTCTGGCAATTTGGCTGTTACTACAGATAGCGATCTCAGTTACAATCCCAGCAGCAACACACTCACAGTGGGCACATTGTTGGCCATCAGCAAGAGCTTCGTGATCGATCACCCCACACTGCCTGGCATGAAACTTCGTTACGCCAGCCTGGAAGGTCCTGAAAACGGGGTGTATGTGCGTGGTCGACTGGAGGGCCACAACATCATAGATTTGCCCTTCTACTGGCCAGACTTGGTCGACGTCAGCACCATCACAGTGCATGTGACACCCATTGGCATGTATCAGCAACTATATGTGAAATCCATTACATCCAACACTGTTGTGATTGAGAACAATTCAGGCGCCATGCTGACAAATTGTTTTTACACAGTTTATGCCGAACGTAGAGACATTGAAAAATTACAGACGGAGTATCCAGCGTGA

Tertiary structure

PDB ID
cad1f73d00e4effec6d6824b7e3b07987eb1d4e6a58216498036d97f0d19eaf5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2417
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50