Protein

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Genbank accession
XPN52166.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNNTYQHVSNESKYVKFDPTGSNFPDTVTTVQSALSKISNIGVNGIPDATMEVKGIAMIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLEGSDNNSSITPQKLKYHTDDVFQNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTATESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGIIRLGTQAEINNNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIMMFAGDSAPPGWIMCHGGTVSGDQYPDYRNMVGTRFGGDWNNPGIPDMRGLFVRGAGTGGHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQISYHKHAGAWGENGNNRGYAPFGASNGSGYLGNGRSADWDNHLFFTNDGFEMGGARDSFGTLNREGLIGYETRPWNISLNYIIKIHY
Physico‐chemical
properties
protein length:518 AA
molecular weight: 55428,74020 Da
isoelectric point:5,84318
aromaticity:0,07722
hydropathy:-0,46120

Domains

Domains [InterPro]
G3DSA:2.10.280.10
246–286
G3DSA:2.10.280.10 IPR037053 IPR044916
IPR015173
246–324
IPR015173 SSF88874
SSF69349
246–346
SSF69349 IPR027448
IPR011083
337–392
IPR011083
XPN52166.1
1 518
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pu-Krd-SF6
[NCBI] 		3389967 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN52166.1 [NCBI]
Genbank nucleotide accession
PQ759886 [NCBI]
CDS location
range 79378 -> 80934
strand -
CDS
ATGAGTAATAATACATATCAGCACGTATCAAATGAATCAAAATATGTTAAATTCGATCCTACTGGATCGAATTTTCCTGACACTGTTACGACGGTGCAGTCTGCATTATCAAAAATAAGTAATATCGGCGTAAATGGTATTCCTGATGCAACTATGGAAGTTAAAGGAATAGCAATGATTGCATCAGAGCAAGAGGTTTTAGATGGAACAAATAATTCTAAAATCGTTACACCAGCTACATTAGCAACAAGATTATTGTATCCAAATGCTACTGAAACTAAATATGGTTTAACGCGTTATTCAACAAATGAAGAAACATTAGAAGGCTCAGATAATAATTCATCAATAACACCACAAAAACTGAAATATCACACTGATGATGTGTTCCAAAATAGATATTCGTCTGAGTCATCAAACGGGGTTATTAAAATATCATCGACGCCTGCAGCTTTGGCTGGTGTCGATGATACTACGGCGATGACTCCGCTGAAAACCCAAAAACTTGCAATAAAATTAATTTCACAAATAGCTCCTTCAGAAGACACTGCAACAGAATCTGTGAGAGGAGTAGTTCAATTATCTACTGTTGCACAAACTCGTCAAGGAACTCTCCGCGAAGGATATGCAATTTCCCCGTATACCTTTATGAATTCTGTTGCAACACAAGAATATAAGGGTATTATACGTCTAGGAACACAAGCAGAAATTAATAATAATTTGGGGGATGTTGCAGTAACAGGTGAAACACTAAATGGTCGAGGAGCTACCGGTTCTATGCGTGGGGTAGTAAAATTAACGACGCAAGCTGGTATTGCTCCTGAAGGTGATAGCTCTGGGGCATTAGCCTGGAACGCAGATGTAATTAATACTCGTGGTGGACAAACTATTAATGGTTCTTTAAATTTAGACCATCTCACAGCAAATGGAATTTGGTCGCGCGGCGGAATGTGGAAAAATGGCGATCAGCCTGTTGCCACTGAAAGATATGCGTCCGAACGGGTTCCGGTTGGAACTATTATGATGTTTGCGGGTGATTCAGCACCTCCAGGTTGGATTATGTGTCATGGTGGAACTGTGTCAGGAGATCAATATCCTGATTATAGAAACATGGTTGGAACAAGATTTGGTGGGGATTGGAATAATCCAGGGATTCCTGATATGCGAGGTCTTTTCGTCAGAGGAGCGGGCACCGGTGGTCATATTTTAAATCAACGAGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGTGATGGAATGCATGTTGGCGGTGTTCAAGCACAACAAATATCATACCATAAACATGCTGGCGCCTGGGGGGAAAATGGAAATAACAGAGGTTATGCACCGTTTGGCGCATCTAATGGCAGTGGATATTTGGGCAATGGTAGAAGCGCCGACTGGGACAACCATTTGTTCTTTACTAACGACGGATTTGAAATGGGTGGGGCTCGTGACTCGTTCGGCACGTTAAATCGCGAAGGGTTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAACTATATTATTAAAATTCATTACTAA

Tertiary structure

PDB ID
02cbe5309815f5cc295e160be9b6315607eec255e28e0f13a38a0ada03167b53
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6642
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50