Protein

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Genbank accession
AGG54528.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MPITINGNGSVTGISVGGLPDGIVDTDMIANEAVTPAKRGEHGILQIKQNSNTTAQINSVTSTSWATSTDAPYVDITPVGANSLYLLHAQWYMDAGADTIPALSFALSTDGGSNWTYNIHMKGYPNPTSYSGTNGNNYGAWMSWGGSMGTDGTGGGDGIRHYETLYKSSIAAGASDIRFACCYRNVYHNSMQHPIAMSTGTNPGCQLRVTEIRV
Physico‐chemical
properties
protein length:214 AA
molecular weight: 22623,80880 Da
isoelectric point:5,54529
aromaticity:0,08411
hydropathy:-0,27757

Taxonomy

Phage
Cyanophage SS120-1 [NCBI] · taxon 616674
Uroviricota Caudoviricetes Autographivirales Banchanvirus SS1201
Host
Prochlorococcus marinus subsp. marinus str. CCMP1375 [NCBI] · taxon 167539
Bacteria Cyanobacteria Prochlorales Prochlorococcaceae Prochlorococcus Prochlorococcus marinus

Coding sequence (CDS)

Genbank protein accession
AGG54528.1 [NCBI]
Genbank nucleotide accession
HQ316584.1 [NCBI]
CDS location
range 15349 -> 15993
strand -
CDS
ATGCCAATAACAATTAATGGAAATGGTAGCGTCACAGGGATTTCTGTAGGCGGTCTACCAGACGGTATAGTAGATACCGATATGATAGCAAATGAAGCTGTCACTCCAGCAAAAAGAGGAGAACATGGGATTCTCCAAATAAAACAAAATAGTAATACCACTGCTCAAATTAACAGTGTTACAAGCACAAGTTGGGCAACAAGTACAGATGCACCTTATGTAGATATAACTCCAGTAGGTGCAAACTCTTTATATTTACTACATGCTCAATGGTATATGGATGCAGGAGCAGATACTATACCTGCACTATCATTTGCACTTAGTACAGATGGCGGATCAAACTGGACTTATAATATTCACATGAAAGGATATCCTAATCCTACAAGTTATAGTGGTACTAATGGTAATAACTATGGAGCTTGGATGTCTTGGGGTGGGTCAATGGGTACAGACGGAACAGGTGGAGGAGATGGTATTAGACATTATGAAACTTTATATAAATCTTCAATTGCAGCAGGTGCATCAGATATAAGATTTGCTTGTTGTTATAGAAATGTATATCACAACAGCATGCAACATCCTATTGCTATGAGTACTGGCACTAACCCCGGATGTCAATTGAGAGTAACGGAGATAAGAGTATGA

Genome Context

Tertiary structure

AGG54528.1
ESMFold structure
Source ESMFold
pLDDT 68.0
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP9 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank