Protein

View in Explore
Genbank accession
XPO96324.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTTITNLPETSKVNGSDYLVLDQPDKTVKSTVSNFLTDTGVVLATQLKDTDGADLIQSSNGNTVQEELNNNLLNDREQWRRSLAEAGLTLVDGSFEEGATLNNNTDAVWYIAGAQCYTWGSGFPKDVPPKSTPTSTGGIGPSTWVSVSSKSLRQDIASNSGFALIGHCPGVSALRGIEPVSNGQKILLSGHTEGYNYGGGEFTAVLDGSTYTDDNGNYIKTTGGAVWIREKKTHAYAADYGFITNDASKATSNAAAIVAAAKFAFENGTDVWLPFGKKYIDDVVLNHPVTICANMTVFGSSLVSREQESDILHIGSGYAFDFTPQVRPTTPSSENPVIDGPALIGLSIRGTNNGKAGWRVNNSTVVGNESYARRNVTIKNCQVSGYHSGYGYEMYWTFTNKLHDVIVWDCAVTYYIRSCYATDHFGCIYENSSYGCLAINCYSNNHYGGAVEGIRSMSAHTKPAGYDENGNSPLSYDGIGFRVRGGNTTFYGGYVEANRIHAQIENAGRFAFSGTYINNTNTERMGHGISGELRVTHCNIQGDPSIGTWVQASASLHCSYAEIHSNAYVSGTTKPNTVPNIASVGEFDVYDGTISDSNGARRVRLGQDFQTGGYQTNGGVPRETYSEIFATRVVNAGNGSADRTVDISALATVTGQITALQSAGTLTFTNTNTAIAKEGRDLCFVINASGACSLVFGSGFRMVSSSPISLKNAQTAVIEFRSQGNKYYQKGPVNIMVT
Physico‐chemical
properties
protein length:739 AA
molecular weight: 79139,46920 Da
isoelectric point:5,63811
aromaticity:0,09608
hydropathy:-0,29418

Domains

Domains [InterPro]
G3DSA:2.10.10.80
89–160
G3DSA:2.10.10.80 IPR011050
IPR040775
93–149
IPR040775
XPO96324.1
1 739
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EF1-1
[NCBI] 		3385239 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPO96324.1 [NCBI]
Genbank nucleotide accession
PQ571289.1 [NCBI]
CDS location
range 87420 -> 89639
strand +
CDS
ATGTCAACTACAATTACTAATTTACCAGAAACATCAAAAGTTAATGGTTCAGATTACCTGGTTTTAGATCAACCTGATAAAACTGTTAAAAGCACAGTTTCCAACTTTCTTACTGACACTGGGGTGGTTTTAGCCACCCAGTTGAAAGATACAGATGGAGCAGATTTAATACAATCCTCAAATGGTAATACTGTTCAGGAAGAGTTGAATAACAATCTTCTTAATGATCGTGAACAGTGGCGTCGTAGTCTTGCTGAGGCAGGGTTAACACTTGTTGATGGTAGCTTTGAGGAGGGTGCTACATTAAATAATAATACTGATGCTGTCTGGTACATAGCGGGTGCTCAGTGCTACACATGGGGGTCTGGTTTCCCTAAAGATGTACCACCTAAATCAACCCCTACATCAACTGGTGGTATTGGCCCTAGTACGTGGGTTAGTGTTTCAAGCAAATCACTACGTCAAGATATCGCGTCAAATTCTGGTTTTGCTTTGATTGGCCATTGCCCTGGTGTTTCCGCGCTGCGAGGTATTGAGCCTGTTTCTAACGGGCAGAAAATTTTGCTGTCTGGTCACACAGAGGGTTACAACTACGGCGGCGGCGAGTTCACAGCAGTGTTGGATGGCAGCACGTACACTGACGATAACGGGAACTACATCAAAACAACTGGCGGCGCTGTCTGGATTCGTGAAAAGAAAACTCACGCGTATGCCGCTGACTATGGTTTCATAACCAACGATGCCAGTAAGGCCACCAGTAATGCTGCCGCTATTGTTGCTGCGGCAAAGTTTGCCTTTGAAAACGGAACCGATGTTTGGCTGCCTTTTGGCAAGAAATATATTGACGATGTTGTTTTAAATCACCCTGTGACAATCTGCGCCAACATGACGGTGTTTGGTTCTTCATTGGTAAGCCGTGAACAGGAATCTGATATCTTACATATTGGTAGTGGTTATGCGTTTGATTTCACGCCACAGGTAAGACCAACAACACCGTCAAGCGAAAATCCTGTTATTGATGGCCCTGCACTAATCGGCCTTTCAATTCGCGGCACAAATAACGGGAAGGCAGGATGGCGCGTAAACAATTCCACCGTGGTTGGAAATGAAAGCTACGCAAGACGTAACGTGACAATCAAAAACTGTCAGGTTTCCGGTTATCATTCCGGTTACGGTTACGAAATGTACTGGACGTTCACGAATAAACTCCATGACGTAATTGTGTGGGATTGCGCAGTCACTTATTATATTCGTTCATGCTATGCAACGGATCACTTTGGTTGCATTTATGAAAATAGTTCTTACGGCTGCCTTGCCATAAACTGCTATTCAAACAATCATTATGGTGGTGCTGTTGAAGGCATCAGATCGATGTCAGCTCACACAAAACCGGCAGGTTATGACGAAAACGGTAATTCACCGCTGTCTTATGACGGAATTGGATTCCGTGTTCGCGGTGGTAACACCACATTCTATGGTGGATATGTAGAAGCAAACCGCATTCACGCACAGATCGAGAACGCTGGACGATTTGCGTTTAGCGGAACCTATATAAACAACACAAACACAGAAAGAATGGGGCACGGTATTTCTGGTGAATTGCGTGTTACACACTGCAACATACAAGGTGATCCTTCGATTGGCACATGGGTGCAGGCGTCAGCGTCGCTTCATTGCTCTTATGCTGAAATTCACTCAAATGCTTATGTTTCAGGGACTACAAAACCAAACACCGTGCCAAACATTGCGTCTGTTGGTGAGTTCGATGTCTATGATGGAACCATTTCTGACAGCAACGGGGCAAGACGTGTTCGCCTCGGTCAGGATTTTCAAACTGGAGGATATCAGACAAACGGTGGTGTGCCGCGCGAAACATACTCTGAAATATTTGCGACAAGGGTTGTTAATGCTGGTAATGGTTCTGCTGACAGAACGGTTGATATCAGCGCACTTGCCACTGTCACAGGGCAAATAACAGCACTTCAAAGCGCTGGGACGCTGACGTTTACAAATACAAATACAGCAATCGCAAAAGAGGGTAGGGATCTGTGTTTTGTTATCAATGCTTCTGGTGCGTGTTCGTTAGTTTTTGGTTCCGGGTTCCGCATGGTGAGTTCATCACCAATAAGCCTGAAAAACGCTCAAACAGCCGTTATCGAATTTAGATCTCAAGGTAACAAATATTATCAAAAAGGGCCTGTAAACATTATGGTGACGTGA

Tertiary structure

PDB ID
f206cc0ba4ede08296502fa9f6b4280ce4be7fe8f653e25d2ddee6e13b48cb5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7454
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50