Protein

View in Explore
Genbank accession
CAB4168780.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MTNVQIPNLPAATALNGSELLEAVQAGTSVRVTSAQIAELGGGPTGPQGNTGPTGPAGATGPTGAKGPTGSTGPQGPTGNTGNTGATGPTGQKGATGSQGLIGPTGSQGQKGPTGPTGQTGPQGPTGATGHVGPTGPTGPTGLQGITGPTGPTGLQGVTGPTGPTGLQGITGPTGPTGLQGVTGPTGPTGLQGITGPTGPTGLQGVTGPTGPTGLQGVTGPTGPTGPTGPTGAASNVVGPTGPTGATGVAGAGITYKGTVATPLALPPTGNQVGDAYIALSNEHLYVWDGLIWTDAGQVGFVGPTGPTGPTGADSAVAGPTGPTGPTGNQGNVGPTGPTGPTGADSTVIGPTGPTGPTGNQGNVGPTGPTGPTGADSTVIGPTGPTGPTGATGPTGAQGVSSSLFLYRADTGATGGDPGAGNLLWNNATQNTATQVNVSHLTDDNVDIDIFLALIVSGETFTIQDKNNSSIYQTFLVTGATTNVNPGAANSYWTIPVSNTASAGGNITNNHQIFLAIVSGITGPTGPTGPTGPTGPTGAASAVAGPTGPTGPTGAASAVAGPTGPTGPTGAASAVAGPTGPTGPTGAASAVAGPTGPTGPTGAASAVAGPTGPTGPTGAASAVAGPTGPTGPTGTTGPNSITIASTTISSGTTTKVLYDNAAVVGELNQTQIVTIYTANNFGGF
Physico‐chemical
properties
protein length:684 AA
molecular weight: 63289,18610 Da
isoelectric point:4,35548
aromaticity:0,02924
hydropathy:-0,16886

Domains

Domains [InterPro]
IPR050149
43–409
IPR050149
IPR008160
43–100
IPR008160
CAB4168780.1
1 684
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4168780.1 [NCBI]
Genbank nucleotide accession
LR796833 [NCBI]
CDS location
range 49344 -> 51398
strand -
CDS
ATGACCAACGTACAAATCCCGAATCTTCCAGCAGCCACAGCGTTAAATGGCAGCGAGCTTCTTGAAGCTGTTCAGGCTGGAACGTCGGTTCGCGTTACGTCGGCTCAGATTGCAGAATTAGGCGGCGGACCCACTGGCCCACAGGGTAATACGGGTCCGACAGGACCGGCTGGCGCTACTGGCCCAACCGGCGCAAAAGGCCCGACAGGCAGCACTGGTCCTCAAGGCCCCACCGGAAACACGGGCAATACAGGCGCGACTGGTCCAACGGGTCAAAAAGGCGCAACTGGCTCACAAGGTTTGATTGGTCCGACTGGTTCGCAAGGACAAAAAGGTCCGACCGGCCCAACGGGGCAGACTGGTCCGCAAGGCCCCACAGGAGCTACGGGTCATGTCGGCCCGACCGGCCCGACCGGCCCAACAGGGCTTCAAGGCATTACTGGCCCCACCGGCCCCACTGGTCTCCAAGGCGTCACCGGTCCAACAGGTCCAACCGGGCTTCAGGGTATCACCGGCCCGACCGGCCCGACTGGTCTTCAGGGGGTCACCGGCCCGACAGGCCCAACCGGGCTTCAGGGTATCACCGGCCCGACCGGCCCGACTGGTCTTCAGGGTGTAACCGGCCCGACCGGCCCGACTGGTCTTCAGGGGGTCACCGGCCCGACAGGCCCCACAGGCCCGACAGGCCCCACTGGCGCGGCTTCCAATGTTGTCGGCCCCACTGGTCCAACTGGTGCAACTGGCGTTGCCGGGGCGGGTATTACTTACAAAGGGACGGTGGCTACGCCCTTAGCTCTGCCGCCTACGGGCAATCAAGTTGGTGATGCGTACATTGCGCTGTCTAATGAGCATTTGTACGTTTGGGACGGCTTGATATGGACCGATGCTGGTCAGGTAGGCTTTGTTGGCCCAACAGGTCCTACCGGTCCCACTGGCGCAGATTCAGCCGTAGCAGGTCCGACCGGCCCCACGGGTCCGACCGGCAACCAGGGCAATGTTGGCCCAACCGGTCCCACCGGACCTACGGGTGCGGATTCTACGGTAATTGGTCCGACCGGCCCGACAGGCCCTACTGGCAACCAAGGCAATGTTGGCCCAACCGGTCCCACCGGACCTACGGGTGCGGATTCTACGGTAATTGGTCCGACCGGCCCGACAGGCCCGACCGGAGCAACCGGCCCGACTGGCGCTCAAGGCGTTTCTTCAAGCCTGTTTCTGTATCGTGCGGATACTGGAGCCACCGGGGGCGACCCAGGTGCTGGGAATTTGTTGTGGAATAATGCCACTCAAAATACAGCGACACAGGTCAATGTCAGCCACCTTACAGATGACAATGTGGACATTGATATTTTCCTTGCGCTTATTGTTTCGGGCGAAACATTTACAATTCAAGATAAAAACAACAGTTCAATCTACCAGACGTTCTTAGTTACTGGCGCGACGACAAACGTCAATCCTGGTGCGGCTAATAGTTATTGGACCATCCCGGTTTCTAACACCGCTTCCGCTGGCGGGAACATAACCAACAACCACCAAATTTTCCTGGCGATTGTTTCTGGCATTACGGGTCCGACCGGCCCGACAGGTCCCACAGGTCCGACTGGTCCTACTGGCGCAGCTTCAGCCGTAGCTGGTCCAACGGGTCCCACGGGTCCGACAGGGGCAGCTTCAGCAGTGGCTGGCCCGACAGGCCCTACGGGTCCGACAGGGGCAGCTTCAGCAGTGGCTGGCCCGACAGGCCCTACGGGTCCGACAGGGGCAGCTTCAGCAGTGGCTGGCCCGACTGGTCCCACGGGTCCGACAGGGGCAGCTTCAGCAGTAGCTGGTCCGACAGGCCCCACGGGTCCGACAGGGGCAGCTTCAGCAGTAGCTGGTCCGACAGGCCCCACCGGGCCAACGGGGACCACTGGCCCTAATTCTATAACGATAGCTTCAACAACTATATCCAGCGGCACTACAACAAAGGTGTTGTATGATAATGCGGCTGTTGTTGGCGAACTGAACCAGACACAGATAGTAACGATTTACACAGCAAATAATTTCGGAGGCTTCTAA

Tertiary structure

PDB ID
944c355508d5d380e2dea28d1313bc30d5d1bcec0810484d09da8d4bac806c91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50