Phage RBP Database

Genbank accession

XYT94660.1 [GenBank]

Protein name

long tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,75

TF

Evidence RBPdetect2

Probability 0,99

Protein sequence

MAGMVIHITDAGRAALVAGGNTGTAARRVVEIGLGTAPFAFDRGMKTMPNERKRVTTFGGENVAPDTVHVVIQDDTSDQYSLYAFGLYLDNGVLFAVYVQDAPILEKSPAAMMLLATDVVFATIDAAKLEFGPATFLNPPATTERKGVVELATQAEVDAGDDDTRAITPKTAKRRYAALSGATFDGRVRVVADVDDRAAQLDVSPKTAGVGKAGKARLFGTFGDATLPDLSPRLVATLRAGFDAGAWGREYVDVCLNDGTNNDAASDAKQKRVARFASGGRVLIGERADDGKTALQVRGGVDASEGVAARAIDAGGAGGQFRAVYDGYGAFIRNDGRSVYFLSTPKGAPDGGFNDYRPFSWSLSTGQVIVDGSGAGTVFGGAVDVARDLEVGRQASEGHIKLGPVDGYLYANPVSTGWWSPAGSSYQYIFADHTFRIDGRMAWHEGNLDPLDKSKGGMLAGDVSFAPGKRLVLAEGSPAAPSLTFANDGAPDTGLYHAADGEFGVTCNGRAVVRFSPALVTFEQPVTVPTPPAADRSTRAATTEWVRTVLSATTIGQIVFEPRTTVRPGFLKANGVLVNRADYPELWAYAQASGALVSDADWMKDRWGCFSTGDGATTFRLPELRGEFIRCWSDARGGVDATRQIGAFQGDQNHTHAHGAAASEAPDHVHTAWTDVQGWHGHHGWTNAVGDHQHVSPWGEHPQMYNPPWGTWGAANNRGAEGSDNDNVYGMTSPAGNHNHEFNTEGNGNHGHAVGIGGGGRHAHTIAVQPDGGDEARPRNVALLALIRAY

Physico‐chemical properties

protein length:	790 AA
molecular weight:	83422,44160 Da
isoelectric point:	5,63999
aromaticity:	0,08734
hydropathy:	-0,28494

Domain architecture

XYT94660.1

1 790 aa

ATT 295–359 · ATT 552–631 · STR 632–789 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048390
ATT

IPR048390 SSF88874

IPR037053
ATT

IPR037053

XYT94660.1

1790 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0662
STR

DC_0662 DC_1872

XYT94660.1

1790 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048390	ATT	DC_0836	295	359	InterPro cluster	Long-tail fiber proximal subunit, trimerization domain	C-terminal	Medium	Text match	656 proteins / 656 hits
SSF88874	STR	SSF88874	545	789	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	552	631	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits

Proteins with similar domain architecture

Phage

Burkholderia phage vB_SBP10b [NCBI] · taxon 3452231

Viruses

Host

Burkholderia pseudomallei [NCBI] · taxon 28450

cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Genbank protein accession

XYT94660.1 [NCBI]

Genbank nucleotide accession

PV987631.1 [NCBI]

CDS location

range 26241 -> 28613
strand -

CDS

ATGGCAGGAATGGTCATCCACATTACCGACGCCGGCCGCGCGGCCCTGGTCGCCGGCGGCAACACCGGCACGGCCGCGCGCCGCGTCGTCGAAATCGGGCTCGGCACCGCGCCGTTCGCGTTCGATCGCGGCATGAAGACGATGCCGAACGAGCGCAAGCGCGTGACGACGTTCGGTGGCGAAAACGTCGCGCCGGACACGGTGCATGTCGTGATCCAGGACGACACGAGCGATCAGTATTCGCTGTACGCGTTCGGCCTGTATCTCGACAACGGCGTGCTGTTCGCCGTGTACGTGCAGGACGCGCCGATTCTCGAAAAATCCCCCGCGGCGATGATGCTGCTCGCGACCGATGTCGTCTTCGCGACGATCGATGCAGCCAAGCTCGAGTTCGGGCCGGCAACGTTCCTGAATCCGCCGGCGACGACCGAGCGCAAGGGCGTGGTCGAGCTCGCCACGCAGGCCGAAGTGGACGCCGGCGACGACGACACGCGCGCGATCACGCCGAAGACGGCGAAGCGGCGCTACGCGGCGCTCTCGGGCGCGACGTTCGACGGGCGCGTGCGCGTCGTCGCCGATGTCGACGATCGCGCCGCGCAGCTCGACGTGTCGCCGAAGACGGCCGGCGTCGGCAAGGCCGGCAAGGCGCGCCTGTTCGGCACGTTCGGCGACGCGACGCTGCCCGATCTGAGCCCGCGCCTGGTCGCGACGCTGCGCGCGGGATTCGACGCCGGCGCGTGGGGGCGCGAGTACGTCGACGTTTGCCTGAACGACGGCACGAACAACGATGCGGCGAGCGACGCGAAGCAGAAGCGCGTCGCACGCTTCGCGTCGGGCGGCCGCGTGCTGATCGGCGAGCGCGCGGACGACGGCAAGACCGCGCTGCAGGTGCGCGGCGGCGTCGACGCATCGGAAGGCGTCGCCGCACGCGCGATCGACGCCGGCGGCGCCGGCGGGCAGTTCCGCGCCGTGTACGACGGCTACGGCGCGTTCATCCGCAACGACGGCCGGAGCGTCTATTTCCTGTCGACACCGAAGGGGGCCCCGGACGGCGGCTTCAATGACTATCGGCCGTTCTCGTGGTCGCTGTCGACAGGGCAGGTGATCGTCGACGGCAGCGGAGCGGGCACGGTCTTCGGCGGCGCCGTGGACGTCGCGCGCGACCTCGAAGTCGGTCGGCAGGCAAGCGAAGGGCATATCAAGCTCGGGCCGGTCGACGGCTACCTCTACGCGAACCCGGTCAGCACCGGTTGGTGGTCGCCGGCGGGATCGTCCTATCAGTACATCTTCGCCGATCACACGTTTCGCATTGACGGGCGGATGGCGTGGCACGAAGGCAATCTCGACCCGCTCGACAAGAGCAAGGGCGGCATGCTGGCCGGCGATGTGTCGTTCGCGCCGGGCAAGCGGCTCGTGCTCGCCGAAGGTAGCCCGGCCGCGCCGTCGCTCACGTTCGCCAACGACGGCGCGCCGGATACCGGCCTCTATCACGCAGCCGACGGCGAGTTCGGCGTGACCTGCAACGGGCGCGCCGTCGTGCGGTTCTCGCCGGCGCTCGTGACCTTCGAGCAACCCGTGACCGTGCCGACGCCGCCGGCGGCGGATCGATCGACGCGCGCCGCGACGACGGAATGGGTGCGCACGGTCCTGTCGGCGACGACGATCGGCCAGATTGTCTTCGAGCCGCGCACGACCGTGCGGCCGGGCTTCCTCAAGGCGAACGGCGTGCTCGTGAACCGTGCCGACTATCCCGAGCTGTGGGCGTATGCGCAGGCGAGCGGCGCGCTCGTCTCCGATGCGGACTGGATGAAGGATCGGTGGGGCTGTTTCTCGACCGGCGACGGCGCGACGACGTTTCGCCTGCCCGAGCTGCGCGGCGAATTCATTCGTTGCTGGTCCGATGCGCGCGGCGGCGTCGACGCGACGCGCCAAATCGGCGCCTTCCAGGGCGACCAGAACCACACGCACGCACACGGCGCCGCGGCAAGCGAAGCGCCGGACCACGTCCACACCGCGTGGACCGACGTGCAGGGCTGGCACGGCCACCACGGTTGGACGAACGCTGTCGGCGACCACCAGCACGTCTCGCCGTGGGGCGAGCACCCGCAGATGTACAACCCGCCGTGGGGCACGTGGGGCGCAGCCAACAACCGCGGCGCGGAGGGCAGCGACAACGACAACGTGTACGGGATGACGAGCCCGGCCGGCAACCACAACCACGAGTTCAACACCGAAGGCAACGGCAATCACGGGCACGCCGTCGGTATCGGCGGCGGTGGCCGGCACGCGCACACGATCGCCGTTCAACCCGACGGCGGCGACGAAGCGCGCCCGCGCAACGTCGCGCTGCTCGCGCTGATTCGCGCCTACTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)