Protein

View in Explore
Genbank accession
BDD79826.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MQIDPSKSAVQNLLALVDASNPSAPNLPSEVTVSNLTSGSYANGADTKVTLTGTGPQGQTANFTGSVDVTYKRLALAAEAVVPSTPPTISVWSSKPTALAAILAYYGYVASEVTAPSMTIPTTAGADTVSLQASGSLIYEDGSTNVNVNWQRKTILLMHFDGGITDAAGHTTANTGTAGYTNASAKFGSGSFTTAAVNAYTSITDATDLHLTSGEWTIEFWLNPTNVTQDTQLIDKTAGARTDFANRAWVELNATALALKVDGTSSATLIGSGYITTGWQHIAIVQHAGTLTIYRNGVSVGSMSNSASWGNNSGNIVLGNNTFANNSNYVGYLDELRISNVARYTANFTAPTAAFALD
Physico‐chemical
properties
protein length:358 AA
molecular weight: 37190,61230 Da
isoelectric point:4,89915
aromaticity:0,08101
hydropathy:-0,02793

Domains

View on InterPro
Domain architecture
BDD79826.1
1 358 aa
STR 7–108 · STR 134–349 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Burkholderia phage FLC9 [NCBI] · taxon 2906467
No lineage information
Host
Burkholderia glumae [NCBI] · taxon 337
cellular organisms Bacteria Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales

Coding sequence (CDS)

Genbank protein accession
BDD79826.1 [NCBI]
Genbank nucleotide accession
LC667451.1 [NCBI]
CDS location
range 234171 -> 235247
strand -
CDS
ATGCAAATCGATCCTTCCAAGTCAGCAGTTCAGAATCTGCTGGCGCTTGTCGATGCGTCGAACCCGTCCGCACCTAATCTACCCAGCGAGGTGACAGTCAGTAATCTCACGTCAGGCTCGTATGCAAATGGTGCCGATACCAAGGTGACGTTGACTGGTACGGGCCCCCAGGGTCAGACTGCGAACTTCACTGGTTCGGTAGATGTGACGTATAAGCGTCTCGCACTAGCTGCCGAAGCAGTTGTCCCGTCTACCCCGCCGACGATCTCAGTGTGGAGTAGTAAGCCCACCGCATTGGCAGCTATTTTGGCGTACTACGGTTATGTCGCCAGCGAAGTAACGGCACCTAGCATGACTATCCCGACCACTGCCGGGGCGGACACGGTGTCACTGCAGGCCAGTGGTTCTTTGATTTACGAGGACGGCAGTACTAACGTCAATGTGAACTGGCAGCGTAAAACAATCCTGCTGATGCACTTTGACGGTGGTATCACTGACGCCGCAGGTCACACGACTGCCAACACGGGTACAGCAGGCTACACCAACGCCTCTGCTAAGTTCGGTAGCGGCTCGTTCACCACTGCGGCCGTTAACGCATACACCAGCATCACGGATGCGACGGACTTGCACTTGACAAGTGGTGAGTGGACAATCGAGTTCTGGCTCAATCCCACCAACGTCACGCAAGACACGCAGCTGATCGATAAGACGGCCGGTGCCCGGACGGACTTCGCTAACCGAGCCTGGGTCGAACTGAATGCGACAGCACTGGCACTTAAGGTGGACGGTACGAGTAGCGCGACGCTCATTGGTAGCGGCTACATCACGACCGGCTGGCAGCACATCGCGATCGTTCAGCATGCGGGCACGCTCACGATCTATCGCAATGGTGTCTCAGTAGGCTCGATGTCCAACTCAGCCAGCTGGGGTAACAACAGCGGTAACATCGTACTGGGTAACAACACCTTCGCTAACAACAGTAATTACGTGGGCTATCTGGACGAACTGCGCATCAGTAATGTGGCTCGCTATACGGCGAACTTCACGGCACCGACTGCGGCTTTCGCACTCGACTAA

Genome Context

Tertiary structure

BDD79826.1
ColabFold structure
Source ColabFold
pLDDT 64.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank