Phage RBP Database

Genbank accession

YP_009325020.1 [GenBank]

Protein name

tail fiber assembly

RBP type

TF

Evidence RBPdetect

Probability 0,83

TF

Evidence RBPdetect2

Probability 0,95

Protein sequence

MTRLTVAQVKDLNNQGGMSFSNGAITANGTITVTNIVINGTISGSSGYIIPNQSGNSGRFLYTNGSSISWQANAINLGIPNSISVYNGNNTWNKPSGVKRIWVMCTGGGGGGSGYGESGAAGAHTESFVDVANINSISVTVGGAGAGTNYNGRGGNGGTSSFGNYCSSGGGQGANRRQQHEGSTGGTPNQGSVRIYGGSSQGHRNPPGLGHGGHSYWGGSAPTAHRQQQWAQRHRGHAAYGAGGSSGRNSERGGDGRVGMIVVYEFI

Physico‐chemical properties

protein length:	267 AA
molecular weight:	27058,97620 Da
isoelectric point:	9,94433
aromaticity:	0,07491
hydropathy:	-0,51049

Domain architecture

YP_009325020.1

1 267 aa

STR 87–257 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR049304
STR

IPR049304

YP_009325020.1

1267 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1790
STR

DC_1790

YP_009325020.1

1267 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR049304	STR	DC_0631	87	257	InterPro cluster	Glycine-rich domain	C-terminal	Low	Positional only	225 proteins / 228 hits

Proteins with similar domain architecture

Phage

Synechococcus phage S-WAM1 [NCBI] · taxon 1815521

Uroviricota Caudoviricetes Pantevenvirales Sokavirus Sokavirus swam1

Host

Synechococcus sp. [NCBI] · taxon 1131

cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae

Genbank protein accession

YP_009325020.1 [NCBI]

Genbank nucleotide accession

NC_031944 [NCBI]

CDS location

range 29335 -> 30138
strand +

CDS

ATGACTAGACTTACTGTTGCACAAGTTAAGGACCTGAATAATCAGGGTGGCATGTCGTTTTCTAATGGAGCGATCACTGCCAACGGTACTATCACGGTAACAAATATCGTGATTAATGGAACCATCTCTGGTAGTTCTGGATATATCATTCCTAACCAGAGTGGAAATTCTGGTAGATTCCTTTACACCAACGGTTCGTCTATTAGTTGGCAGGCAAATGCGATCAACCTAGGTATTCCTAATTCGATCTCTGTCTATAATGGCAACAACACTTGGAACAAACCATCAGGCGTAAAACGTATCTGGGTTATGTGTACTGGTGGAGGTGGTGGTGGATCAGGTTATGGAGAATCAGGTGCCGCTGGTGCTCACACTGAGTCATTTGTAGACGTAGCAAACATCAACTCGATTAGTGTTACTGTTGGTGGTGCTGGTGCTGGTACTAATTATAACGGTCGTGGTGGTAATGGAGGAACATCTTCCTTCGGTAACTATTGCTCCTCTGGTGGTGGACAAGGTGCCAACCGCAGACAACAGCACGAAGGGTCAACGGGTGGCACCCCTAACCAAGGTTCTGTCAGAATCTATGGTGGATCTTCTCAGGGTCACAGAAATCCTCCTGGTTTAGGTCACGGTGGACATTCTTATTGGGGTGGATCTGCACCAACTGCACACCGTCAACAACAATGGGCACAAAGACATAGAGGACATGCTGCATATGGTGCTGGTGGTTCCTCAGGTCGTAACTCTGAGCGTGGTGGTGATGGACGTGTAGGCATGATTGTCGTGTACGAATTTATTTGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)