Protein

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Genbank accession
YP_006560258.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MALPIFQRTVTNSAGDVIEGAQVSVFDESTGLLSTIYSNREGTAALSNPFLTGSDGLASFYAQQGEYRISVSSVAGSVTWRYQPLIGTLDEGAAVLQAGIYAQESAGYANTAIDARDVAIGAANYKGDWTVSTNVLQGESYSYSGSTWIAKQNSVGQTPAVGVYWLKGVGTAAFLNVGTTPNDIPTVSTLVSSRSALLKTDRNTVAFEVSGADVLASQDFSYSTDGSIFEILSGEVVTLPTLASASDYKIYGLSDGSLSAQLFDTARPTGGVLIGGFHVYHTTGGINPNSLWDINFRPKCNPRAMTLSPDRRVWADIYLMDVEYGLNGYSRSDVTIADGASPPIVPAIYGGNGVTTYGSLTWFEAWDLVINAGKRLAFWGEFSGLAYGVVEQQSFGTDPVTTKYQAGHRSAIGLEQATGVMWIWGADTQGSSGSAAAITDGRGSVYSGDPRSVLLGAGWNDGVAAGSRSASWNASTGGSDGGISVRAVCDHLIL
Physico‐chemical
properties
protein length:494 AA
molecular weight: 51740,61670 Da
isoelectric point:4,57624
aromaticity:0,10121
hydropathy:-0,00182

Domains

View on InterPro
Domain architecture
YP_006560258.1
1 494 aa
STR 195–486 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
YP_006560258.1
1 494 aa
Domain Start End Length (AA) Confidence
N-terminal 1 244 244 0,8207
Central domain 245 443 200 0,0025
C-terminal 444 494 50 0,9968
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Marinomonas phage P12026 [NCBI] · taxon 1176423
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Marinomonas [NCBI] · taxon 28253
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales
Host
Marinomonas sp. [NCBI] · taxon 1904862
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales

Coding sequence (CDS)

Genbank protein accession
YP_006560258.1 [NCBI]
Genbank nucleotide accession
NC_018269 [NCBI]
CDS location
range 14218 -> 15702
strand +
CDS
ATGGCATTACCAATATTTCAGCGAACAGTGACAAACAGCGCCGGAGACGTGATTGAAGGCGCTCAGGTTTCCGTATTTGATGAATCAACAGGTCTTCTGTCTACGATTTACAGCAACAGAGAAGGGACGGCAGCTCTATCTAATCCATTCTTGACGGGATCGGACGGTCTAGCTTCATTCTACGCCCAGCAGGGTGAATACAGAATCTCTGTCTCAAGCGTTGCGGGATCGGTGACTTGGCGCTACCAGCCTTTGATCGGCACTTTAGATGAAGGTGCGGCAGTGTTGCAGGCTGGGATCTATGCGCAAGAATCGGCAGGCTACGCAAATACAGCAATTGACGCTCGCGATGTAGCCATTGGTGCAGCTAACTATAAAGGCGACTGGACAGTATCAACTAACGTGCTGCAGGGCGAGTCATACAGCTACTCTGGAAGCACTTGGATAGCTAAACAAAACAGCGTAGGCCAAACGCCTGCCGTTGGTGTGTACTGGCTCAAAGGCGTTGGCACGGCTGCATTTCTAAATGTAGGTACAACCCCAAATGACATTCCTACCGTTTCAACACTGGTTTCTTCGCGATCAGCATTATTAAAAACAGATCGCAACACCGTAGCTTTCGAAGTTTCTGGGGCTGACGTGCTAGCCTCGCAAGATTTTTCATATTCAACTGATGGCAGTATATTTGAAATATTGTCAGGTGAGGTAGTCACCCTACCAACACTTGCGAGCGCCTCTGATTATAAAATTTATGGATTGTCTGATGGCAGCTTATCTGCTCAATTGTTCGACACAGCAAGACCAACTGGCGGTGTTCTCATTGGTGGATTCCACGTCTACCACACCACAGGGGGGATTAACCCGAATAGTCTGTGGGATATAAATTTTAGACCTAAATGTAATCCACGCGCAATGACTCTATCACCGGATCGACGTGTTTGGGCGGACATCTATTTGATGGATGTTGAATATGGTTTAAATGGCTATAGCAGATCAGATGTGACTATAGCAGACGGGGCTAGCCCTCCTATAGTACCCGCCATCTACGGTGGTAATGGAGTGACGACTTACGGATCTTTAACGTGGTTCGAAGCATGGGATCTAGTAATAAACGCTGGTAAGCGCCTTGCGTTCTGGGGGGAGTTTAGCGGCTTAGCTTACGGTGTTGTTGAGCAGCAGAGTTTCGGTACAGATCCAGTGACTACTAAGTACCAAGCAGGTCATCGCAGCGCAATAGGTTTAGAGCAAGCAACGGGGGTAATGTGGATATGGGGAGCGGATACGCAGGGTTCGTCTGGCTCCGCTGCGGCAATCACTGATGGTCGGGGTAGTGTTTACAGTGGTGATCCACGTTCGGTGCTACTTGGTGCCGGCTGGAACGATGGTGTTGCTGCAGGTTCTCGTTCTGCGAGCTGGAACGCCTCAACTGGCGGCTCCGACGGCGGCATCAGTGTCCGTGCCGTCTGTGACCACTTGATCCTGTGA

Genome Context

Tertiary structure

YP_006560258.1
ESMFold structure
Source ESMFold
pLDDT 71.5
Oligomeric state monomer
Download structure