Protein

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UniProt accession
A0A2K9VCP8 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,97
Protein sequence
MADYSGLIDKFKTDDIPKGTDYEELITLAGNAKDEADNSVIDNHDGTITVNEQKYKPVEDNKDGNITVNGTKYKPVEDNEDNTITVNGITFAPVIDNQNGTITVNTQTYEPAHADKVPLKSDIGSITDYTIAGNNLVQKIVSDFKSRSFNVLYYGATSDKSSDSAPAINQAIEDASKVGGTVWVPAGTYLLSNDLIFKSNITFKMDNNATLYAPGQLFRFDTTSTGYNGGVSNVVVDGGTFSGDYDAKNVVNSHANANAFNGCLHHASNIEFKNITFRMTTSNSHTLDLGGCRDINIHDCVFEGFYPQPVREYVEAIQIDYSSKVGLTYHDSIQDANVDGLITINVKIENNTFRPIYGEDGTTIKWYAPNMCGEHVVYSNGEPTNIVIKNNHITDGYVFDDNRGSVGWIHFFGVHNVIIQGNVFESTKQQQSLAIGIICSNADGLTDAVSGNTVSGTYSYQSDVIIKDNTFKGFKTGSVNHGVISVYGNDTHGSTNLQIIDNNFIDNLPDSFDWTTDTPGIDLIQTRGFKDTKVNNNYANDLRRFLFMQENDGTTIQSSYQVNNNIVKNVAYVPIVMRTLPASNQTIDINNNQFNMVRECVTVLNTNGYTNFVNNDILFHTSSHLSSTNGYSNSAVTIGSYNLNLANNTVIQSSNSAYQYPNAFVLSAGPISYSGNYFNGSSISNWKVPKESLLSTQQRFGVQSDAIVCPSGTDIGTFLMGASVPIGLSIIRDNNTATNLIVYKENSNYGYALKPSTKDGSFQIGHWYQGTWTSWANI
Physico‐chemical
properties
protein length:778 AA
molecular weight: 85250,83130 Da
isoelectric point:4,81804
aromaticity:0,10154
hydropathy:-0,36722

Domains

View on InterPro
Domain architecture
A0A2K9VCP8
1 778 aa
STR 144–572 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
A0A2K9VCP8
1 778 aa
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9881
Central domain 162 686 526 0,9916
C-terminal 687 778 91 0,9535
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Lactobacillus phage Bacchae [NCBI] · taxon 2079429
Uroviricota Caudoviricetes Herelleviridae Harbinvirus bacchae
Host No host information

Coding sequence (CDS)

Genbank protein accession
AUV59992.1 [NCBI]
Genbank nucleotide accession
MG765277 [NCBI]
CDS location
range 61933 -> 64269
strand +
CDS
TTGGCAGACTACAGTGGTTTGATTGATAAGTTTAAAACAGATGATATACCTAAAGGTACAGATTATGAAGAGTTAATTACCTTAGCTGGAAACGCAAAGGACGAAGCCGATAACTCCGTTATAGACAACCATGATGGAACTATTACAGTTAACGAGCAAAAGTATAAGCCAGTTGAGGATAACAAAGATGGTAACATTACCGTTAACGGGACAAAATATAAACCTGTAGAGGATAACGAGGACAACACCATTACTGTGAATGGGATAACGTTTGCTCCAGTAATAGATAACCAGAATGGTACTATTACGGTTAACACCCAAACTTATGAGCCTGCTCATGCAGATAAGGTGCCCTTAAAATCTGATATTGGCAGTATCACTGATTATACAATCGCAGGAAACAACTTGGTTCAAAAGATAGTATCTGACTTTAAGTCAAGAAGCTTTAATGTTTTATACTATGGGGCAACTTCTGATAAGTCTTCTGATAGCGCCCCGGCTATTAACCAAGCCATAGAAGATGCTAGTAAGGTAGGCGGTACTGTATGGGTTCCGGCAGGGACTTATTTATTAAGTAATGATTTAATATTTAAGTCTAATATAACCTTTAAGATGGATAATAATGCTACCCTTTATGCTCCGGGGCAGTTATTTAGATTTGACACAACCTCTACCGGATATAATGGTGGTGTATCTAATGTAGTTGTAGATGGTGGAACTTTTTCGGGGGATTATGATGCCAAGAATGTTGTTAACTCACATGCCAATGCAAATGCCTTTAACGGGTGTTTGCATCATGCTAGCAACATTGAGTTCAAGAATATAACGTTCAGAATGACTACTTCCAACAGTCACACCCTTGACCTTGGAGGTTGTAGAGATATTAATATTCACGATTGTGTCTTTGAAGGATTCTACCCGCAGCCCGTAAGAGAATATGTTGAGGCTATCCAAATAGATTACTCATCAAAAGTAGGGTTAACTTATCATGATTCTATTCAGGATGCTAATGTTGACGGGTTAATTACAATTAATGTTAAAATAGAAAATAATACCTTTAGGCCAATTTATGGGGAAGATGGCACTACTATTAAATGGTATGCGCCTAATATGTGCGGAGAACATGTTGTATACTCTAATGGGGAGCCAACTAACATTGTTATAAAAAACAACCATATAACTGATGGATATGTATTTGATGACAATCGAGGGTCGGTAGGTTGGATACATTTCTTTGGGGTTCACAATGTTATAATACAGGGTAATGTTTTTGAGTCAACAAAACAACAACAGAGCTTAGCCATTGGAATTATATGTTCTAATGCAGATGGCCTAACAGATGCTGTTTCCGGTAATACGGTTTCAGGAACTTACAGCTATCAATCTGATGTTATAATAAAAGATAATACTTTTAAGGGATTTAAAACCGGTTCAGTAAACCATGGTGTAATTAGTGTATATGGGAACGACACTCATGGTAGCACTAACTTACAGATTATTGATAATAACTTTATTGACAATTTGCCAGATAGTTTTGACTGGACTACCGATACCCCCGGAATAGACTTAATTCAAACGCGCGGATTTAAGGATACTAAGGTTAACAACAATTATGCCAATGATTTAAGGCGATTCTTATTTATGCAAGAAAATGATGGAACGACCATACAGTCAAGCTATCAAGTCAACAACAATATTGTCAAAAATGTGGCTTATGTACCTATAGTAATGAGAACGCTCCCTGCGTCTAATCAGACAATAGATATAAATAATAACCAGTTTAACATGGTAAGGGAATGTGTTACTGTATTAAATACTAATGGTTATACTAATTTTGTTAATAATGATATCTTGTTCCATACCTCATCTCACTTAAGTTCAACCAATGGATACTCCAACAGCGCTGTTACTATTGGTAGCTATAATCTAAATCTGGCTAATAATACTGTTATTCAGAGTAGCAATTCTGCTTATCAATACCCAAATGCTTTCGTGCTATCAGCGGGCCCAATTAGTTACTCAGGAAACTATTTTAACGGTAGTAGCATATCCAACTGGAAAGTACCAAAAGAGAGTTTGTTGTCTACTCAACAGCGGTTTGGCGTTCAGTCTGATGCAATTGTCTGCCCTTCTGGTACTGACATAGGAACATTTTTAATGGGTGCTTCTGTACCAATTGGACTAAGTATTATACGCGATAACAATACTGCTACGAACCTTATTGTTTATAAGGAAAATAGCAATTATGGTTACGCTTTAAAGCCAAGTACAAAGGATGGAAGTTTTCAGATAGGACATTGGTACCAAGGAACATGGACTAGTTGGGCTAACATTTAA

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

A0A2K9VCP8
ESMFold structure
Source ESMFold
pLDDT 72.3
Oligomeric state monomer
Download structure