Protein

View in Explore
Genbank accession
YP_011993069.1 [GenBank]
Protein name
baseplate hub protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence Phold
Probability 1,00
Protein sequence
MKQILDSAKTYLNTHDKLKTACLIALELPSSSGSAATYIYLTDYFRDVTYNGILYRSGKVKSIGSHKQNRELSIGSLSFTITGTAEDEVLKLVQNGVSFLDRTITIHQAIIDEEGNILPVDPDTNGPLLFFRGRITGGGIKDNVTTSGIGTSVITWNCSNQFYDFDRVNGRYTDDASHRGLEVVNGQLQPSNGAKRPEYQEDYGFFHSNKSTTILAKYQVKEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGVQKIPGIPIFADTELNNPNIVYVVYAFSEGEIDGFLDFYIGDSPMICFDETDSNTRTCFGRKKLVGDTMHRLAAGTSTSQPSVHGQEYKYNDGNGDIRIWTFHGKPDQTAAQVLVDIAKRKGFYLQNQNGNGPEYWDSRYKLLDTAYAVVRFTINENRTEIPEISAEVQGKKVKVYSSDGSVKADKTSLNGIWQLMDYLTSERYGANITLDQFPLQKIISEAKILDIIDESYQVSWQPYWRYVGWSDSISEHRQVVQLNTILDTSESVFKNVQGILESFGGAINNLSGEYRITVEKHSTTPLKIGFLDTYGDLDLSDTTGRNKFNSVQASLVDPALSWKTNSITFYNSKFKEQDKGLDKKLQLSFANITNYYTARSYADRELKKSRYSRTLSFSVPYKFIGIEPNDPIAFTYERYGWKDKFFLVDEVENTRDGKINLVLQEYGEDVFINSEQVDNSGNGIPDISNNVLPPRDFKYTPTPGGMIGAIGKNGELSWLPSLTNNVVYYSITHSGHVDPYIIQQLENNPNERMIQEIIGEPTGLAIFELRAVDINGRRSSPVTLSVDLNSARNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDKIPEEEIIPEIYYTLEIHDSQDRMLRSIRIEDAYTYDYLLTYNKADFALLNSGALGINRKLRFRIRAEGKNGEQSVGWATI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107079,72010 Da
isoelectric point:5,52358
aromaticity:0,11064
hydropathy:-0,44015

Domains

Domains [InterPro]
IPR032876
601–686
IPR032876
YP_011993069.1
1 949
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HildyBeyeler
[NCBI] 		2852005 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011993069.1 [NCBI]
Genbank nucleotide accession
NC_105119 [NCBI]
CDS location
range 16211 -> 19060
strand +
CDS
ATGAAGCAGATACTCGATAGTGCTAAAACATATCTTAATACTCATGACAAGCTAAAAACAGCTTGTCTTATAGCTTTAGAGCTTCCTAGTTCATCAGGCTCTGCTGCTACTTATATTTATTTAACTGACTACTTTAGAGATGTTACTTATAACGGAATCTTATATAGATCTGGTAAAGTAAAAAGTATCGGCTCCCATAAACAAAACCGTGAACTATCTATTGGTAGTTTATCTTTTACCATAACTGGTACAGCAGAAGATGAAGTATTAAAACTAGTTCAAAATGGGGTATCTTTCTTAGATAGAACTATCACTATACATCAAGCTATAATTGATGAAGAAGGTAATATTCTCCCTGTAGATCCTGATACTAATGGACCTTTACTATTCTTCCGTGGTAGAATTACCGGAGGCGGAATAAAAGATAATGTTACTACCTCAGGAATAGGAACCTCTGTTATCACATGGAACTGTTCCAACCAGTTCTATGACTTTGATAGGGTGAATGGTCGTTATACCGATGATGCTTCTCACCGAGGACTTGAAGTTGTTAATGGACAATTACAGCCTTCTAATGGGGCTAAACGTCCTGAATATCAAGAAGACTATGGATTCTTCCACTCTAATAAAAGTACCACTATCTTAGCTAAGTATCAAGTAAAAGAAGAACGCTATAAACTTCAGTCCAAGAAGAAACTCTTTGGTCTATCAAGAAGTTACAGTCTTAAAAAATATTATGAGACTGTAACTAAAGAAGTTGATTTAGACTTTAACTTAGCTGCTAAATTTATACCTGTTGTATATGGAGTTCAGAAAATTCCTGGTATCCCTATTTTTGCAGATACTGAGTTAAATAACCCTAATATAGTGTATGTAGTCTATGCTTTTTCGGAAGGAGAAATTGACGGATTCCTAGATTTCTATATCGGGGACAGCCCAATGATCTGTTTTGATGAAACAGATTCCAATACTAGAACCTGCTTCGGTCGTAAGAAACTAGTGGGTGATACAATGCACAGACTAGCTGCTGGTACAAGCACTTCTCAACCTTCTGTTCATGGTCAGGAGTATAAGTATAATGATGGTAATGGTGACATAAGAATATGGACTTTTCATGGCAAACCAGACCAGACAGCAGCTCAAGTATTAGTGGATATTGCTAAAAGAAAAGGTTTCTATTTACAGAATCAAAATGGCAATGGACCAGAATACTGGGATTCTCGTTATAAACTCTTAGACACAGCCTACGCTGTAGTTAGATTTACTATTAACGAGAATAGAACTGAAATTCCAGAAATTAGTGCTGAAGTACAAGGTAAGAAAGTCAAAGTATATAGTTCTGATGGGTCTGTTAAAGCTGATAAAACTAGCCTTAACGGTATCTGGCAGCTTATGGACTATCTAACCTCTGAACGTTATGGAGCTAACATAACTCTAGATCAGTTCCCACTACAAAAGATTATATCAGAAGCAAAAATTCTAGATATAATTGATGAGTCTTATCAGGTTAGCTGGCAACCTTACTGGCGTTACGTTGGATGGAGTGATTCTATATCTGAACATCGTCAAGTAGTTCAATTAAACACCATACTAGATACTTCTGAATCAGTTTTTAAAAACGTTCAAGGTATATTAGAATCATTTGGTGGGGCTATAAATAACCTGTCAGGTGAGTATAGAATAACAGTAGAAAAACATTCTACAACTCCATTAAAAATAGGTTTTCTAGACACTTATGGTGACTTAGACTTATCTGATACTACTGGTAGAAATAAATTTAACTCAGTACAAGCATCGTTAGTAGATCCTGCACTAAGCTGGAAAACAAACTCTATCACGTTCTATAACTCGAAGTTTAAAGAGCAGGATAAAGGTCTTGACAAGAAACTCCAGTTATCTTTTGCTAATATTACTAATTACTACACTGCTAGGAGTTACGCAGATAGAGAACTTAAGAAATCTAGGTACTCGCGTACTTTAAGTTTTTCTGTACCATATAAATTTATAGGTATAGAGCCTAACGATCCTATTGCTTTCACATATGAACGTTATGGCTGGAAGGACAAATTCTTCCTGGTTGACGAAGTAGAAAATACTCGTGATGGTAAAATTAATCTAGTTCTACAAGAGTACGGGGAAGATGTATTTATTAATTCCGAACAGGTAGATAATAGTGGTAATGGTATTCCTGATATTAGTAATAACGTTCTACCTCCTAGAGACTTTAAATATACACCAACTCCTGGTGGTATGATAGGTGCTATAGGTAAAAATGGGGAACTATCTTGGCTACCTAGTCTTACTAATAACGTAGTATACTACTCTATAACTCATTCAGGTCATGTAGATCCTTATATAATTCAGCAATTAGAGAATAATCCTAATGAAAGGATGATTCAGGAGATTATAGGTGAGCCTACTGGTTTAGCTATTTTTGAGCTACGCGCAGTAGATATTAACGGTAGACGTAGTTCCCCTGTTACTCTTTCTGTGGATCTTAATTCTGCTAGAAACTTAAGTGTAGTTAGTAACTTTAGAGTAACTAATACAGCTTCTGGAGACGTGACTGAATTTGTTGGACCAGACGTGAAACTTGCTTGGGATAAGATACCTGAGGAAGAAATAATTCCAGAAATTTACTATACTCTAGAAATACATGATTCTCAGGATAGAATGCTTCGTAGTATAAGGATAGAGGATGCCTATACTTATGACTATCTATTAACATATAATAAGGCGGATTTTGCACTATTAAACTCCGGTGCTTTAGGAATTAATCGTAAACTACGATTTAGGATTAGAGCAGAGGGGAAAAATGGTGAGCAATCTGTTGGTTGGGCTACTATTTAA

Tertiary structure

PDB ID
d0dd7f5d7a947200034bfdd0616d38de692c8da772324e5be712884a5fa9ec65
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2355
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank