Phage RBP Database

Genbank accession

GENB_56bbd1c15ac7 [GenBank]

Protein name

receptor binding protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TF

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,94

Protein sequence

MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVGLKLARRRASGGGSYALNPGVEIDSSLMVVDFPPKPLNFKATGGFGSVLLEWDMPNYRGHSLTEVWRGTEDDLADAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWHAVGGVAAQTQISVQALIDQIKEEAANSPVVEELRQEIKDAEGRAVQEAGVQTTEVVGNLREETLKTIGGVETRITDMDSSTSESLNEVNERITKLDEGGSKAFLSMWSKKAGADGVTAGIGIVAGKDSSGGAVSQVAISASQLFVFDPNDPDNTAYPFAVSGGKVVITKAMISDAVIETLVSQKIVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDENGRLAVRIGRLS

Physico‐chemical properties

protein length:	422 AA
molecular weight:	44908,92560 Da
isoelectric point:	5,01209
aromaticity:	0,06161
hydropathy:	-0,16445

Domain architecture

GENB_56bbd1c15ac7

1 422 aa

RBD 258–360 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053171
Unmapped

IPR053171 IPR015406

Coil
Unmapped

Coil

GENB_56bbd1c15ac7

1422 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_1230
STR

DC_1230

GENB_56bbd1c15ac7

1422 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	72	249	InterPro	Viral Tip Attachment Protein	-	-	-	-
Coil	Unmapped	-	184	204	Coils	Coil	-	-	-	-
IPR015406	RBD	DC_0135	258	360	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Proteins with similar domain architecture

Phage

Stx2a-converting phage Stx2_13518 [NCBI] · taxon 2816186

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

No CDS data available.

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)