Phage RBP Database

UniProt accession

K4F6L0 [UniProt]

Protein name

Colanic acid-degrading protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,99

Protein sequence

MSDLSVVAERYLISESSVCHASDGQLLDDIKIVVHSDDSEWYVPTLPKGTLLKSLSLSSNVDGTCTCKLVHTNGSTDLVSATHISSNISGNTAIRQLPANDSRLIRFLSFEQYGAISGGTVECSAAINACLNDARKYNLPIWSTGKYYINNIVDFSNVTASGFTLVGGASSPNSYCVLVNGSANIDNVNFEKVYLQHTNGDLKLTNFTFKKVGATAAVLSLNLTSEGSVTLQYGTFRQCNYGYLRQGDPLWGSALRFQHLKNLQFFDMNGDCIELNLGIKDRNTEVSDILVDNVNHTGKNLFWGIALGFAGKTPYGLDADDSSYMSDVSIKRVKVYGARQCLHFEKCRNIYLEDIEMYPDSTKSVNSGIDPAGIILYGSKDISIKDVKGKPDQASIKMIHTSWGVTDDAYICAERNILVRDVDVDGNIELNMSTNDVYNSYLRVYNVSCNVFAITGQASEFHVENVRCSNILLDFQPVTNTSKDQLRRHNRITATFKDIVSKDENQDCVCSIKNIAIDELTVQNCNFPFFKQSTSTITRGTPITKLDGIYHYDSEGFPNGYQFKVGDRIIDSTGKMYVVKQSGAVFSSYEKVRSAVCGQNYLVSYNMNWLSAYKTAGTRIRIPGAGENGTDLVCTVVRSSHVNNGMYRIILSDTIKTDIPDGTQILPENICKY

Physico‐chemical properties

protein length:	673 AA
molecular weight:	74296,81400 Da
isoelectric point:	5,84938
aromaticity:	0,09064
hydropathy:	-0,20921

Domain architecture

K4F6L0

1 673 aa

STR 109–524 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR011050
STR

IPR011050

IPR023882
RBD

IPR023882

IPR011050
STR

IPR011050

K4F6L0

1673 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_2249
ATT

DC_2249 DC_0045

K4F6L0

1673 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR011050	STR	IPR011050	109	359	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR023882	RBD	DC_0588	234	430	InterPro cluster	Colanic acid biosynthesis WcaM	C-terminal	Low	Positional only	146 proteins / 146 hits
IPR011050	STR	IPR011050	324	524	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

K4F6L0

1 673 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	122	122	0,9543
Central domain	123	549	428	0,9861
C-terminal	550	673	123	0,8937

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Cronobacter phage vB_CsaM_GAP32 [NCBI] · taxon 1141136

Uroviricota Caudoviricetes Mimasvirus

Host

Cronobacter sakazakii [NCBI] · taxon 28141

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

No CDS data available.

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)