Phage RBP Database

Genbank accession

YP_009903484.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,87

Protein sequence

MALYREGKASLAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTNGAVVASTDYAILLSDSLTVDGLAQDVAETLRYYQSQETAIADAVDSFKDFDFELFKNLASQVKADSEAANVSAANAADSENSSKTSETNAKTSETNAKSSENAAKTSEIAAENARDAAVAAQQESENAAAESKNYVIQASEVGNMFSDEAAGLAATSNGQFFQVPQGSGSFVSFKLFKNNNGVAEEVAQVPGSAAITGTIRDFPTLASAQADADAGNIPVGSTAYYRSADDATLAIEVMNVGGTLQPTGRTMLSEQGVDDKIDARLVPGPYRPSYVPLFHDANGRVPLWLKDGLPDAAGFGPNLRGEVAAIPNQWAQQYLAQMSYSTRYFPLFHDRNGNVPLWLKNGRLDGAGFGPGLLGVITALIESATGGAGNADKYFIPGDQYKFLFKRGLVFSGENTSLNVAFTGDSWTEANTIPQSMINVLGCTSKDPGWISCSTRASSVMSGITLSRSGFTQYDGDNENGNASPLYGSGPDGIALYNTGTASWIMWSGVKATDLTLFYYDGTGSFDIVIDGTITATITGGNTGKALTHVISGLASSAHTVRIQAPGDGVVSILGMYGKDSGNPRGVTVSRMGNSGAMASDYLFWKDWIAPVASYLDIDMLFIILGTNDFRKSAGTVEYENGIQTIIDKYKAATPGICICLISPAQGNATGTPELEEYDSSMRKLAVNNGINFISGYHIFPKSYSNANGAWQDNLHLSSKGAMVLTSTIKNHFFQE

Physico‐chemical properties

protein length:	785 AA
molecular weight:	82958,30710 Da
isoelectric point:	4,74318
aromaticity:	0,08917
hydropathy:	-0,14726

Domain architecture

YP_009903484.1

1 785 aa

STR 464–782 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR036514

G3DSA:2.60.120.1360
Unmapped

G3DSA:2.60.120.1360 IPR013830

SSF52266
STR

SSF52266

YP_009903484.1

1785 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0006
STR

DC_0006

YP_009903484.1

1785 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	175	195	Coils	Coil	-	-	-	-
IPR036514	STR	IPR036514	464	772	Merged direct domain	SGNH hydrolase superfamily	Central	Low	Positional only	180 proteins / 180 hits
G3DSA:2.60.120.1360	Unmapped	-	496	634	Gene3D	None	-	-	-	-
SSF52266	STR	SSF52266	633	782	Merged direct domain	SSF52266	Central	Low	Positional only	227 proteins / 227 hits
IPR013830	ENZ	DC_0001	641	771	InterPro cluster	SGNH hydrolase-type esterase domain	C-terminal	High	Text match	480 proteins / 783 hits

Proteins with similar domain architecture

Phage

Klebsiella phage Sin4 [NCBI] · taxon 2580406

Uroviricota Caudoviricetes Drexlerviridae Webervirus sin4

Host

Klebsiella pneumoniae [NCBI] · taxon 573

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

YP_009903484.1 [NCBI]

Genbank nucleotide accession

NC_049847 [NCBI]

CDS location

range 29477 -> 31834
strand -

CDS

ATGGCACTATACAGAGAAGGCAAGGCGTCACTCGCCGCAGACGGAACCGTTACCGGAACTGGCACAAAATGGCAATCATCGCTTTCGCTAATTCGACCTGGCGCGACGATTATGTTTTTGTCGTCACCAATTCAAATGGCTGTGGTAAACAAGGTGGTCAGTGACACTGAAATTAAAGCAATTACCACAAACGGCGCTGTCGTAGCGTCTACTGACTACGCGATCCTGTTAAGCGACTCGCTGACAGTTGATGGTCTGGCGCAAGATGTTGCGGAAACTTTGCGCTACTATCAGTCGCAGGAAACCGCAATTGCGGATGCAGTCGATTCCTTTAAGGATTTCGATTTCGAGTTGTTTAAAAATCTTGCCAGTCAGGTGAAGGCAGACTCTGAAGCTGCTAACGTAAGCGCTGCTAATGCTGCGGATTCTGAAAACTCGTCAAAAACTTCAGAAACTAACGCCAAAACCTCAGAGACTAACGCCAAATCTTCTGAAAACGCGGCGAAAACTTCAGAGATTGCAGCGGAGAATGCAAGGGATGCCGCAGTAGCTGCGCAGCAAGAGTCAGAAAATGCCGCAGCAGAATCTAAGAACTATGTAATTCAGGCGTCGGAAGTGGGAAACATGTTCTCGGATGAGGCGGCAGGATTAGCTGCTACATCAAATGGTCAATTCTTTCAGGTTCCTCAGGGTTCTGGAAGTTTTGTTTCATTCAAACTTTTTAAAAATAATAATGGCGTTGCTGAAGAAGTTGCGCAAGTTCCAGGCTCGGCAGCAATAACAGGCACAATCCGTGATTTTCCTACGCTTGCCTCGGCTCAGGCGGACGCAGATGCTGGCAACATACCTGTAGGATCAACTGCGTATTATCGAAGCGCCGACGACGCAACGCTAGCGATCGAGGTCATGAACGTTGGCGGGACATTGCAGCCTACTGGCAGGACAATGCTGTCTGAGCAGGGCGTTGATGACAAGATTGACGCCAGGCTGGTTCCTGGCCCTTACCGTCCCTCATACGTTCCGCTTTTTCATGATGCAAATGGTAGAGTACCACTCTGGCTAAAAGACGGCCTCCCCGATGCTGCTGGTTTTGGTCCTAATCTACGTGGTGAGGTAGCCGCCATTCCAAACCAGTGGGCGCAACAATACCTGGCTCAGATGAGCTATAGCACGAGGTATTTCCCGTTGTTCCATGACCGGAATGGCAATGTGCCTCTTTGGTTGAAAAATGGACGCCTGGACGGCGCGGGATTTGGTCCGGGATTGCTGGGTGTTATAACAGCGCTGATTGAAAGCGCGACTGGCGGGGCCGGGAACGCAGATAAATATTTCATCCCGGGCGACCAATATAAATTCCTTTTCAAACGCGGCTTGGTTTTTAGCGGAGAAAACACCAGTCTGAACGTCGCATTTACGGGTGACTCGTGGACTGAGGCCAACACCATCCCCCAGTCAATGATTAATGTACTTGGTTGCACATCAAAAGACCCAGGATGGATTAGTTGCTCAACAAGGGCCAGTAGCGTTATGTCAGGCATCACGCTATCGAGAAGCGGATTCACTCAATATGACGGAGATAATGAAAATGGGAACGCATCCCCTTTATATGGTTCAGGCCCTGACGGGATCGCGCTTTACAATACCGGTACGGCAAGCTGGATTATGTGGTCTGGAGTTAAGGCAACGGATTTGACGCTGTTCTATTATGATGGAACAGGTAGTTTCGATATCGTTATCGATGGGACCATAACGGCAACCATTACAGGGGGGAATACCGGCAAGGCGCTTACTCATGTAATTTCTGGACTGGCTTCATCGGCCCACACAGTAAGGATTCAGGCTCCGGGAGATGGTGTTGTATCTATACTTGGTATGTACGGAAAAGATTCCGGAAACCCTCGCGGAGTTACTGTTTCGAGAATGGGGAACAGCGGCGCAATGGCCAGTGATTACCTATTCTGGAAAGACTGGATCGCACCAGTTGCCTCGTATCTGGATATTGATATGCTGTTTATCATTCTCGGAACCAACGATTTTCGCAAGAGCGCGGGAACGGTAGAGTATGAAAACGGAATTCAGACGATCATTGACAAATACAAAGCTGCTACTCCGGGTATATGTATTTGTCTGATTTCTCCTGCGCAGGGCAATGCAACCGGAACCCCGGAGCTTGAGGAATATGATTCTTCAATGAGGAAGTTAGCTGTTAATAACGGAATAAACTTTATCAGTGGGTATCATATTTTCCCTAAATCATACAGCAATGCTAATGGTGCGTGGCAGGATAATTTGCATCTGTCAAGCAAAGGTGCTATGGTCCTCACCAGCACCATCAAAAACCATTTCTTCCAGGAGTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)