Phage RBP Database

UniProt accession

G9J3I8 [UniProt]

Protein name

Pre-neck appendage

RBP type

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect2

Probability 0,97

Protein sequence

MNNINKLNPIDLNCSIFTVYDYTGMSMQEILCQFFSKINELIDSQNQVIDLAKWLVGQGLKKEVAKQLNQWLIDGTLSTIINETVFRDLNNKINSNIENIKNNKKEIDKLVTVWNNLKCFNVADFGAIGDGETNNNKAFDDAINSCVENNIRGLLIPNGKFYITEGINTKGVKIIGMGDPYIPFLEWEYTRPNSKLDEYKKYLNKCRGSIITSDKNINIFTNGLYAENIGIFGNRRALTQNGIGQMDGGFGNWIEIEKVKIHGCGNCGINAEYGLITPIINQCWMYQNGNNGIRIGKNKGTYTGETNCLLIEKCFINRNESHGIYLDVKGRGYTIKNNDLEQNGEMSDPLRNNKGTDYNNIVYCCYMKVEGDGGFTSGSIDFSNNYSEETLGLLYLESPDNKICQGVKFESNMWRPYNQELYSNGLLLKGWIEGVKIGNNNMYGRHKVRVINANTYGIETDTDITNPVYKNKNISIEKHYDYNGTMVDFRSTGRVEKYSIENMIQSASYDGSTYTNVYLNKPSVPYELQEDGQGNKLIGTTFLTSDGTSIGLVVDFSWTQGLFKIRKDRTSLIKTGNAKFMENGGFTTINGGNTPVKIYVDHDNEIVIL

Physico‐chemical properties

protein length:	609 AA
molecular weight:	68676,69620 Da
isoelectric point:	5,68460
aromaticity:	0,10181
hydropathy:	-0,47635

Domain architecture

G9J3I8

1 609 aa

STR 118–541 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil IPR011050

IPR012334
STR

IPR012334

IPR024535
ENZ

IPR024535

G9J3I8

1609 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0396
ATT

DC_0396 DC_0525

G9J3I8

1609 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	90	110	Coils	Coil	-	-	-	-
IPR011050	STR	IPR011050	118	488	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR012334	STR	IPR012334	119	541	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR024535	ENZ	DC_0410	120	342	InterPro cluster	Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain	Central	High	Text match	420 proteins / 426 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

G9J3I8

1 609 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	133	133	0,9884
Central domain	134	503	371	0,9842
C-terminal	504	609	105	0,9032

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Clostridium phage phi24R [NCBI] · taxon 1128071

Uroviricota Caudoviricetes Guelinviridae Gregsiragusavirus Gregsiragusavirus phi24R

Host

Clostridium perfringens [NCBI] · taxon 1502

cellular organisms Bacteria Bacillati Bacillota Clostridia Eubacteriales

No CDS data available.

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Gene Ontology

Tertiary structure

Predicted Aligned Error (PAE)