Protein

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UniProt accession
G9J3I8 [UniProt]
Protein name
Pre-neck appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MNNINKLNPIDLNCSIFTVYDYTGMSMQEILCQFFSKINELIDSQNQVIDLAKWLVGQGLKKEVAKQLNQWLIDGTLSTIINETVFRDLNNKINSNIENIKNNKKEIDKLVTVWNNLKCFNVADFGAIGDGETNNNKAFDDAINSCVENNIRGLLIPNGKFYITEGINTKGVKIIGMGDPYIPFLEWEYTRPNSKLDEYKKYLNKCRGSIITSDKNINIFTNGLYAENIGIFGNRRALTQNGIGQMDGGFGNWIEIEKVKIHGCGNCGINAEYGLITPIINQCWMYQNGNNGIRIGKNKGTYTGETNCLLIEKCFINRNESHGIYLDVKGRGYTIKNNDLEQNGEMSDPLRNNKGTDYNNIVYCCYMKVEGDGGFTSGSIDFSNNYSEETLGLLYLESPDNKICQGVKFESNMWRPYNQELYSNGLLLKGWIEGVKIGNNNMYGRHKVRVINANTYGIETDTDITNPVYKNKNISIEKHYDYNGTMVDFRSTGRVEKYSIENMIQSASYDGSTYTNVYLNKPSVPYELQEDGQGNKLIGTTFLTSDGTSIGLVVDFSWTQGLFKIRKDRTSLIKTGNAKFMENGGFTTINGGNTPVKIYVDHDNEIVIL
Physico‐chemical
properties
protein length:609 AA
molecular weight: 68676,69620 Da
isoelectric point:5,68460
aromaticity:0,10181
hydropathy:-0,47635

Domains

Domains [InterPro]
Coil
90–110
Coil IPR011050
IPR012334
119–541
IPR012334
IPR024535
120–342
IPR024535
G9J3I8
1 609
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phi24R
[NCBI] 		1128071 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 Bacteria > Firmicutes > Clostridia > Clostridiales > Clostridiaceae > Clostridium

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
63df4a306f422b4da3ab90dc60f8cb520876da6e78473eb15f65198f34bca648
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the podoviral bacteriophage ΦCP24R, which is virulent for Clostridium perfringens. Morales CA, Oakley BB, Garrish JK, Siragusa GR, Ard MB, Seal BS 2012-04 22218967 PubMed
Complete genome sequence of the podoviral bacteriophage ΦCP24R, which is virulent for Clostridium perfringens Cesar A. Morales, Brian B. Oakley, Johnna K. Garrish, Gregory R. Siragusa, Mary B. Ard, Bruce S. Seal 2012-01-05 10.1007/s00705-011-1218-2 DOI