Phage RBP Database

Genbank accession

CCI88419.2 [GenBank]

Protein name

Phage tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MAGVNGRYDSVILGVSQQTPHDRRSGQMDGQDNFLSDPVRGLARRWGSKQTARQNVSSANLTDPVLTALAGKFMTKAFFCDGREYELIYAKQPTPETGGVFCYDRLNKKFLNVQYDGALANSIKNNGISSLVNIGRLMVMSVNNNKPAYTTQQVKPLKNTARPGVIWIRQGSYSRNYSVVITYTDGSQATVTHKTMGASYEGILDTSDIPWNKDNPGAYTKAVADRTNKYNTAVTQHIAASTEDIQPDTIAKKFRDKIATQLGIGNHIAATGSYVYFSAGANIANVTSTDGGDSTFMRTVVDSLDDIDKLSPWHYNGMVIRISPKKQSEKDSFYVQATTKDGSNFGEVAWKECPGQRFTPNNVFCIAWADGNTLFIGSSPESLNIMTTNKADCPRLEPSVVGDDKTSPVPYFLSGRTINYLGIFQDRLLVSSGAVVFASRPGDYFNWFRATVLNVEDNDPVEMYALGSEDDVIRWDSSFDRNHILHGEKNQYLLPGRSVLSPKNPSIQIMSAVEGTTGSEPQSSGSVVFFSKGATYGGSLHQIQMGASTDSSESYECSQQLDTYIDGRPCQILSVVSPYYVIMRLSNSLNKMYIYTYLDSMQGGERLFDSWSRWTWDSELGPCCGIAYFREELVKFSFRRGVGGVYIVADQMYLHSETSPDPYLDSMVNFGQYQEEIKQWPQALRDKLVVVYGREHSQNLMGTPYNELDKNMPELRLPENANRAWAGFNYDTLCRLTNPFIRDXDGKSIINGRLTLGNLTLSLDNSGGVEVFVETSGRRSRTVSFEGRLLTRITNKVGRVPLVDYGVKLPVYREVRECQVEFRALTWLPLTVSGIEWKGQYFNNLKRV

Physico‐chemical properties

protein length:	848 AA
molecular weight:	94523,12860 Da
isoelectric point:	6,81604
aromaticity:	0,10390
hydropathy:	-0,41039

Domain architecture

CCI88419.2

1 848 aa

TTP 1–847 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR058003
TTP

IPR058003

CCI88419.2

1848 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0058
STR

DC_0058

CCI88419.2

1848 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR058003	TTP	DC_0684	1	847	InterPro cluster	Tail tubular protein gp12	Central	High	Text match	1810 proteins / 1902 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

CCI88419.2

1 848 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	188	188	0,7584
Central domain	189	397	210	0,2816
C-terminal	398	848	450	0,3837

Note: Constraints were applied during segmentation.
Fixed 17 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Yersinia phage phiR8-01 [NCBI] · taxon 1206556

Uroviricota Caudoviricetes Autographivirales Melnykvirinae Pienvirus

Host No host information

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)