Phage RBP Database

Genbank accession

UIU28238.1 [GenBank]

Protein name

tail fiber protein

RBP type

TSP

Evidence RBPdetect

Probability 0,88

TF

Evidence RBPdetect2

Probability 0,97

Protein sequence

MIQKVISGSKGGSPKPHNPVEMEDNLISINKIKILLAVSDGEIDETFNLKQLMFNSVPVQNEDGSFNFEGVTAEFRSGTQTQEYIKGMEDSSSEVTVNREITTDNPYTISVTNKTLSAIRIKMFMPRGVRIESNGDKNGVRVEYEVQQAVDSGSFETVLTDVIEGKTMSGYDRSRRINLPNFNNQVIFRIVRKTPDSDNSNVVDAIQVKSYAEVIDAKFRYPLTGLLFVEFDSKMFPNQLPTISIRKRWKIINVPSNYDPESRTYNGNWDGTFKKAWTNNPAWVLYDLMINQRYGLDQKELGISVDKWALYEAAQYCDQMVPDGKGGTEPRYLCDVIIQSQTDAYKVIRDICSIFRGMSFWNGESISVIIDRPREPAYIFTNDNVVNGDFSYTFASEKSMYTTCNVMFDDEQNMYQQDVEPVFDREATLRFGNNVTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVVAIADNFWSSNLTMNLSGRLLEVSGRQIFLPFRVDARAGDFIIVNKPDGKPVKRTISSVSADGKTIEINIGFGFPVKPNTVFAIDRTDLALQQYVVTKIDKGDDDEEFTYKITAVEYDPNKYDEIDYGVNIDDRPTSIVEPDQIPRPENVKVSSESRIVQGMSVETMIVSWDKVPYAVFYDVQWRKDNGNWQNVPQTANKEVYVEGIYAGNYQVRVRSVAGSGTTSGWSNIVAATLTGKQGEPGRPINLTATDDVVFGIRTKWGFSDGSGDTAYTELQQSPDGTVDNASLLSLIPYPQHEYYHSPMPGGNIVWYRVRTVDRIGNVSQWTDFVRGMASTNVDDIIGEISVDIENSPGYEWLVDNATDNAAQNAANAEAAIENALANDKDAIYMKKENGKRKAEYTKSLKLIADETQARVTSIEQLKASFDDQISASNSELREVIATETGAISREIDQLKAQIGDDIQASLTDIREAIANETEARTQADLTLNARLGNNEAALAQKLDSWSNASSTGAMYGVKLGLKYNGQEYSAGMAMSLIGSGAAVKAQILFEASRFAIMTGMNGKTQYPFVVENGQVILSSAIIKNGFITNAMIGNVIQSNNFSSGSAGWMVNKNGSAEFNAVTVRGKLYASNGEFAFNGTGNTVQINNNGITVNLPGGGKVVVGRW

Physico‐chemical properties

protein length:	1150 AA
molecular weight:	127364,09910 Da
isoelectric point:	4,91796
aromaticity:	0,09043
hydropathy:	-0,37678

Domain architecture

UIU28238.1

1 1150 aa

ATT 92–217 · ATT 340–488 · STR 627–722 · RBD 983–1118 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053171
Unmapped

IPR053171 IPR015406

IPR055385
ATT

IPR055385 IPR032876 IPR013783 Coil

IPR003961
STR

IPR003961

IPR036116
STR

IPR036116

UIU28238.1

11150 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0014
STR

DC_0014

UIU28238.1

11150 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	3	862	InterPro	Viral Tip Attachment Protein	-	-	-	-
IPR055385	ATT	DC_0360	92	217	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	340	488	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR013783	STR	IPR013783	627	720	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	628	722	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	629	715	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
Coil	Unmapped	-	847	867	Coils	Coil	-	-	-	-
IPR015406	RBD	DC_0135	983	1118	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

UIU28238.1

1 1150 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	505	505	0,8735
Central domain	506	1002	498	0,0722
C-terminal	1003	1150	147	0,3773

Note: Constraints were applied during segmentation.
Fixed 54 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Escherichia phage vB_EcoS_SA12KD [NCBI] · taxon 2909744

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host No host information

Genbank protein accession

UIU28238.1 [NCBI]

Genbank nucleotide accession

OL960582 [NCBI]

CDS location

range 16648 -> 20100
strand +

CDS

ATGATTCAAAAAGTGATAAGTGGTTCGAAAGGCGGCTCTCCTAAGCCTCACAATCCAGTTGAAATGGAAGATAACCTGATCTCAATCAACAAAATAAAGATTCTTCTGGCAGTATCTGATGGCGAGATTGACGAAACATTCAACCTCAAGCAGCTGATGTTTAACTCAGTCCCGGTGCAAAACGAGGATGGCTCTTTCAACTTTGAAGGCGTAACGGCAGAGTTCAGGTCGGGCACGCAGACTCAGGAATACATCAAAGGTATGGAGGATAGCTCCAGCGAGGTAACTGTAAACCGTGAGATTACTACCGATAATCCATACACGATCTCAGTAACCAACAAGACGCTGTCGGCAATCCGTATCAAAATGTTCATGCCTCGCGGCGTACGCATTGAAAGTAACGGCGATAAGAACGGCGTTCGCGTTGAGTACGAAGTGCAGCAAGCGGTTGATAGTGGTTCGTTTGAGACTGTTCTCACTGACGTAATCGAAGGCAAAACAATGTCAGGTTACGACCGAAGTCGTCGAATAAACTTACCAAACTTCAACAACCAGGTGATATTCAGGATTGTTAGAAAGACTCCAGACTCTGATAACTCAAACGTTGTCGATGCAATTCAGGTAAAAAGCTATGCTGAGGTTATCGATGCCAAGTTCCGTTATCCCCTGACTGGTCTTCTTTTTGTCGAGTTTGATTCGAAAATGTTCCCAAACCAACTACCTACGATCTCAATTCGTAAGCGCTGGAAGATTATTAACGTTCCATCGAATTACGACCCTGAATCGCGAACATACAACGGAAATTGGGATGGTACTTTCAAGAAGGCGTGGACTAACAATCCGGCATGGGTTCTATACGACCTGATGATTAATCAGCGTTATGGACTGGATCAGAAAGAGCTTGGAATCTCCGTAGATAAATGGGCGCTATATGAGGCCGCGCAATATTGCGATCAGATGGTTCCAGATGGAAAGGGTGGAACTGAGCCTCGCTACCTTTGCGACGTGATAATTCAGTCACAAACTGATGCATACAAAGTGATTCGAGATATTTGCTCAATATTCCGAGGTATGAGCTTTTGGAATGGTGAAAGCATTTCTGTAATCATCGACAGACCGCGTGAGCCTGCGTACATCTTCACTAACGACAACGTTGTTAATGGTGACTTCTCATACACGTTCGCAAGCGAAAAGAGCATGTACACGACGTGTAACGTGATGTTTGATGATGAACAAAACATGTATCAGCAGGACGTTGAGCCAGTATTCGATCGAGAGGCCACTCTACGGTTCGGTAACAATGTAACCAGCATTACAGCGATCGGATGTACCAGACGCAGCGAGGCTAACCGACGCGGGAGATGGATTCTGAAAACTAACCTCCGCAGCACTACGGTAAACTTCGCTACCGGGCTTGAGGGTATGATCCCGACCATCGGTGATGTGGTGGCGATAGCTGACAACTTCTGGTCAAGTAACTTGACTATGAACCTGTCAGGAAGATTGCTCGAAGTGTCTGGACGTCAGATTTTCTTGCCGTTCCGAGTGGATGCGCGCGCAGGTGACTTTATTATCGTAAATAAGCCAGATGGAAAGCCCGTGAAGCGCACAATCTCAAGCGTTAGTGCAGATGGCAAGACCATAGAGATTAACATCGGCTTTGGCTTTCCTGTTAAGCCTAACACTGTATTCGCAATCGACCGCACTGACCTGGCATTGCAGCAGTACGTCGTGACAAAAATCGACAAGGGTGATGACGATGAGGAATTTACCTACAAGATTACTGCGGTGGAGTACGATCCTAACAAGTACGACGAGATTGATTACGGCGTAAACATCGATGACAGACCGACGAGCATTGTTGAGCCAGACCAGATTCCTAGACCGGAAAACGTGAAAGTATCCTCAGAGTCTAGAATCGTGCAGGGAATGAGCGTAGAAACGATGATTGTTAGCTGGGACAAAGTGCCGTACGCAGTTTTCTATGACGTCCAGTGGAGAAAGGATAATGGAAACTGGCAGAACGTCCCGCAGACGGCAAACAAGGAGGTTTATGTTGAAGGGATTTACGCTGGAAACTATCAGGTTCGCGTGCGATCAGTAGCTGGTTCCGGAACGACTTCGGGATGGTCAAATATCGTCGCAGCGACGCTGACAGGTAAGCAGGGTGAGCCTGGTCGACCGATTAACCTTACAGCTACGGATGACGTTGTTTTTGGTATCCGTACAAAGTGGGGGTTCTCTGATGGTTCTGGAGATACGGCCTATACAGAATTGCAACAGTCACCGGATGGAACGGTTGATAACGCAAGTTTGCTATCTCTTATTCCATACCCGCAGCATGAGTATTATCACTCACCGATGCCTGGAGGGAATATTGTGTGGTATCGGGTAAGGACGGTTGACAGGATCGGTAACGTATCTCAGTGGACTGATTTTGTCAGAGGCATGGCATCAACAAACGTTGACGATATCATCGGAGAGATTTCTGTCGATATCGAAAACTCGCCGGGTTACGAGTGGCTTGTTGATAACGCAACAGACAACGCGGCGCAGAACGCAGCTAACGCAGAGGCGGCAATAGAAAACGCGCTCGCCAATGACAAAGATGCGATCTACATGAAGAAGGAGAACGGAAAACGAAAAGCTGAGTACACGAAATCACTTAAACTTATTGCTGATGAGACGCAGGCGCGAGTGACGTCGATCGAGCAGTTGAAGGCAAGTTTTGACGATCAGATTAGCGCAAGCAATAGCGAGTTGCGTGAAGTTATAGCAACCGAGACTGGAGCGATATCGCGTGAAATTGACCAACTCAAGGCTCAGATTGGTGACGATATTCAGGCGAGCTTGACAGATATCAGAGAGGCTATCGCAAACGAGACTGAGGCCAGAACTCAGGCCGACTTAACGTTAAACGCGAGGCTTGGAAATAACGAGGCGGCACTTGCTCAAAAACTTGACTCTTGGAGTAATGCGAGTTCTACCGGGGCGATGTACGGCGTTAAGCTGGGGCTGAAATACAACGGGCAGGAATACAGCGCAGGAATGGCTATGTCCCTGATTGGTTCCGGCGCGGCTGTTAAGGCTCAGATTCTTTTTGAGGCGTCACGATTTGCAATCATGACCGGGATGAATGGAAAGACACAATACCCGTTTGTTGTTGAGAATGGTCAGGTTATTTTAAGTAGCGCGATCATTAAAAACGGATTCATCACTAATGCTATGATTGGAAACGTTATTCAATCGAATAACTTCTCTTCAGGTAGTGCTGGATGGATGGTTAACAAGAATGGATCGGCTGAGTTTAATGCGGTTACTGTCAGAGGCAAACTTTACGCAAGTAACGGTGAGTTTGCATTCAACGGAACGGGTAATACCGTTCAGATTAACAATAACGGCATCACGGTAAACTTACCTGGTGGCGGGAAAGTTGTAGTGGGGAGGTGGTAA

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)