Protein

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UniProt accession
A0A088F834 [UniProt]
Protein name
Tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,98
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSTGCSDVLTLNDLQIAKKHQIFEAEVITGKQGGVAGGADIGYATNQVTGQTQKTLPAVLRDAGFSPASFNFATGGTLGINDANKAVLWPIEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVVQRMDKGYKPNINDLDIWGSLPDHIKNQTAGATLRVMSGSNITVNSPEATFGGYVFTLCNRILVKNPRNFIAWESGITFENHHTSAWGYGNWVVGGEIKYGSGCAVLFIRNDGGEDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDINADTGPQVERVDDYPLSQYPWFQLPTEHIIRNIITRDCMGIGAWWDGQRNIIDNVVTYEAHKEGIFDRGTNNDITNVTVIGANKDVVNVNQLTCEGSSRLRGVMIHAYTTQGYAVYAPQSEISAVACAGSGTKKILCTYVSDVQGGNINVQHNENQMTLAMRPAMHGTINPSLLMTADCQVAAPGGEASIVKLSAIQEGVRVGEMQLNRLGFKHMSIPVAPSALPESALEHNSSIGFFFGDDGVLRILIKKPDGTYKTHDLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73436,50580 Da
isoelectric point:5,31157
aromaticity:0,08876
hydropathy:-0,23314

Domains

View on InterPro
Domain architecture
A0A088F834
1 676 aa
ATT 65–136 · STR 137–675 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
A0A088F834
1 676 aa
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9925
Central domain 156 558 404 0,9868
C-terminal 559 676 117 0,9255
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Salmonella phage LSPA1 [NCBI] · taxon 1540823
Uroviricota Caudoviricetes Sarkviridae Jerseyvirus Jerseyvirus LSPA1
Host
Salmonella paratyphi [NCBI] · taxon 54388
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Coding sequence (CDS)

Genbank protein accession
AIM41130.1 [NCBI]
Genbank nucleotide accession
KM272358 [NCBI]
CDS location
range 23643 -> 25673
strand +
CDS
ATGTCTACTGGTTGCAGCGATGTACTGACACTTAACGATTTACAAATAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGTGGTGTAGCCGGCGGTGCAGATATCGGCTACGCCACTAACCAGGTAACAGGGCAGACGCAGAAGACGCTGCCGGCGGTCTTACGTGACGCCGGTTTCTCCCCGGCGTCCTTTAACTTCGCAACCGGCGGAACCCTGGGAATTAACGATGCCAATAAAGCTGTTCTTTGGCCTATAGAGGATGGCGGGGATGGGAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCGTCCACCCCTCTAACAACCGGCGGCATTTCTGATTCGGCTTGGGTAGCTTTTGGGGACATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCTGTTGATAGTGTTCTTATCGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGCATGCTAATATGGGAACAACTCGGCGAAGGGTCTGTTGTGAATCAACCACATATGCAGACACAAACCACACCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCATCAACGGTGCTGGCGTCGGTAGTCCAAAGGATGGATAAGGGGTATAAGCCCAATATTAACGATTTGGATATCTGGGGTAGCCTTCCTGATCACATAAAAAATCAAACAGCCGGTGCGACCCTCCGCGTTATGAGCGGATCAAACATAACCGTAAATTCACCGGAAGCGACTTTCGGCGGTTATGTATTCACTCTATGTAATCGTATATTGGTTAAAAACCCACGAAATTTTATCGCATGGGAGTCGGGTATTACTTTTGAAAACCACCATACATCCGCATGGGGCTATGGTAACTGGGTCGTCGGCGGAGAGATAAAGTACGGTTCAGGGTGCGCCGTTTTGTTTATCCGCAATGACGGCGGTGAAGACCATGATGGCGGGGTCAGGGATTTAATATCATATCGCGTTGGTGAATCTGGAGTTAAAACTTATCAAAACGAGATTGGTGGAAGGTCCGCCCGAAACTACCGTCTGGTGTTTGATAACATTACGACCATACAGTGCTATTACGACGGGATAGATATCAACGCGGATACAGGCCCCCAGGTTGAGCGCGTAGATGATTACCCGCTCTCCCAATACCCCTGGTTTCAGTTGCCGACTGAACACATCATCCGCAATATCATTACACGTGACTGCATGGGTATCGGCGCGTGGTGGGATGGGCAAAGAAATATCATTGATAATGTTGTAACCTACGAGGCCCATAAAGAGGGTATTTTTGATAGAGGTACTAACAACGACATCACTAACGTAACAGTTATCGGCGCAAACAAGGACGTAGTTAACGTTAACCAGCTTACTTGCGAGGGCAGTAGCAGATTGCGGGGCGTTATGATTCATGCCTACACCACGCAAGGGTATGCCGTATACGCACCACAATCGGAAATATCCGCTGTCGCTTGCGCAGGGAGCGGGACCAAGAAAATACTTTGTACCTATGTCAGTGATGTGCAAGGGGGTAACATCAATGTCCAACACAATGAAAACCAGATGACACTCGCTATGCGCCCTGCGATGCACGGTACCATAAATCCATCACTATTGATGACCGCAGATTGTCAAGTGGCGGCACCTGGTGGGGAGGCAAGCATTGTGAAGCTTTCCGCAATCCAGGAGGGGGTGCGCGTGGGCGAGATGCAGCTTAACCGCTTAGGCTTTAAGCATATGAGCATACCAGTAGCCCCATCAGCTCTACCGGAAAGCGCATTAGAGCATAATTCATCTATAGGCTTTTTCTTTGGAGATGACGGGGTGCTGCGAATCCTCATCAAGAAACCAGACGGGACTTACAAAACCCACGACTTATCCTAA

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

A0A088F834
ESMFold structure
Source ESMFold
pLDDT 73.0
Oligomeric state monomer
Download structure