Phage RBP Database

Genbank accession

ALP46985.1 [GenBank]

Protein name

short tail fibers protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence RBPdetect

Probability 0,78

TF

Evidence RBPdetect2

Probability 0,84

Protein sequence

MELFDDSALAPLPSLPYATTTEVGIVEYATQAEANALDDLLTVITPASLDGVDQFVSPATSTQLGNLQELRNTDLTRTYSSSDASRLLSYRRLNEMMTTRNALADDTTNESQGFAEFANLSETLAYNPDRFISPLRTWNLIKAEIPNPWAQATETYTGVLRTVAERDGYKSDGSIAITVKGLNYVKATTSKRGAFKLTQNNYERNASDSDEYAITPGTIDNLIATPTKHGFFELPSSYVNDSTKATSAALGVDLNTLLGPDGGTITGVLKCDNIYTNIISRQKQSSYGGTYYTTVREQREMFPNNQLDAKIGLEGRPVGSIFHCTSSVDPNEIFGGVWYKMRAGRTMMGQGIGNDGFTRRYYAAGSFSDIDRVQLYESNLPQHQHAGWGEAYTGSREGCIRYETHRSPYGVTYTCDEYNTVSYWRFGITGSRNNPGSKSTDRDNYMYYNEAVGGNEPHENMMPYYPVYIWRRVK

Physico‐chemical properties

protein length:	474 AA
molecular weight:	52734,70230 Da
isoelectric point:	5,13565
aromaticity:	0,10759
hydropathy:	-0,56055

Domain architecture

ALP46985.1

1 474 aa

ATT 317–473 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR053827
ATT

IPR053827

IPR044916
STR

IPR044916

ALP46985.1

1474 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0176
STR

DC_0176

ALP46985.1

1474 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053827	ATT	DC_0313	317	473	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits
IPR044916	STR	IPR044916	341	461	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits

Proteins with similar domain architecture

Phage

Vibrio phage phi-Grn1 [NCBI] · taxon 1747713

Uroviricota Caudoviricetes Pantevenvirales Schizotequatrovirus Schizotequatrovirus valkk3

Host

Vibrio alginolyticus [NCBI] · taxon 663

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales

Genbank protein accession

ALP46985.1 [NCBI]

Genbank nucleotide accession

KT919972.1 [NCBI]

CDS location

range 71620 -> 73044
strand +

CDS

ATGGAGCTATTTGACGATAGCGCATTAGCACCACTTCCGTCACTTCCGTATGCGACAACGACTGAGGTTGGTATTGTTGAGTACGCAACTCAAGCAGAAGCTAATGCACTTGACGACTTATTAACTGTAATCACACCAGCGTCACTAGACGGGGTTGATCAGTTCGTGTCTCCAGCAACCAGTACTCAGTTAGGTAATCTACAAGAATTGCGTAATACTGATTTGACAAGAACATATTCGTCATCAGATGCAAGTCGTTTGCTGTCATATCGCCGTCTAAATGAAATGATGACGACTCGTAATGCACTAGCAGATGACACAACAAACGAATCACAAGGTTTTGCTGAGTTTGCAAATCTAAGCGAAACTTTAGCATATAACCCTGATCGATTCATTTCTCCACTTAGAACGTGGAACTTAATTAAAGCAGAGATACCAAACCCTTGGGCTCAAGCGACAGAAACATACACGGGCGTGCTTCGTACTGTAGCAGAACGAGACGGGTATAAATCAGACGGTTCGATTGCAATTACAGTTAAAGGTCTGAATTACGTTAAAGCGACGACATCTAAGCGCGGTGCATTCAAATTAACGCAGAACAATTATGAACGTAATGCAAGCGATTCCGATGAATATGCTATAACTCCCGGTACAATTGACAATCTAATAGCGACACCGACTAAACACGGGTTCTTTGAACTGCCAAGCTCGTATGTAAACGACTCAACGAAAGCCACAAGTGCTGCACTTGGTGTTGATTTGAATACACTATTGGGCCCAGACGGTGGTACAATTACTGGTGTTTTGAAGTGCGACAACATTTACACAAACATCATTTCTCGTCAAAAGCAGAGCAGCTATGGTGGAACATATTACACAACTGTGCGAGAGCAGAGAGAAATGTTCCCAAACAACCAATTAGACGCGAAGATCGGTCTCGAAGGGCGCCCTGTGGGTAGTATTTTTCACTGTACTTCATCAGTTGACCCGAATGAGATTTTCGGTGGCGTATGGTATAAGATGAGAGCAGGTCGAACTATGATGGGGCAGGGTATCGGTAATGATGGGTTCACTCGCAGATATTACGCAGCGGGTTCGTTCAGTGACATCGACCGTGTTCAGTTATACGAGAGTAATTTACCACAACACCAACACGCAGGTTGGGGTGAAGCATATACAGGCTCACGCGAGGGGTGTATTCGCTACGAAACTCATCGAAGCCCGTATGGTGTAACATATACGTGTGATGAATATAATACTGTCAGTTACTGGAGATTCGGTATAACAGGTTCGCGTAATAATCCCGGTTCGAAATCTACTGATCGTGATAATTACATGTATTACAACGAAGCAGTTGGTGGTAATGAGCCGCATGAGAATATGATGCCATACTACCCAGTTTACATTTGGAGACGAGTTAAATGA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)