Protein

View in Explore
Genbank accession
ALA46459.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MYSVQIAVSDGTLARISLSIEYFEKDDITLYRNLETTPLVLGTDWQWDGDTTINLLTNTPVTDGEYITVRRNTNIDRAFNIYDGGAAFSRDTLDENFRQMIYLAQEFTEGNGLTGLFFPLDMHGFKITNLGDGTDPKDAVNKGQLDVVDQRVTNLEESFVTNTVSYPWYELTTVVKDTFSPPFVFDKAAVFLNGICQTLGYSYVVVSNQILLADPVPVGTMFFARLGEDVGLDPDYATADQLAAAIVDRVAEDAALQTQVDSKAAKGVNSDITQITGLTTPLSTAQGGTGNNTGTALTATKLATARALQVALGSTTAASFDGTADVSPGVSGTLPLANGGTGATAAPAARTNLGSGTTGDAVFVASTPLAGRNALQAATYIGVVDGSPASAGNVGEVLTAVSASPVALTSGVAANVTSLALTPGIWEVTSIGQSIPAGGGSSGGVSAGLSTVSATLPTNWYEVYTRGYSVNGTATTSLPTRMFNITTNTTVYCVVNLTFSGGTYTARGTITARRIR
Physico‐chemical
properties
protein length:516 AA
molecular weight: 53759,22810 Da
isoelectric point:4,39623
aromaticity:0,07946
hydropathy:0,06163

Domains

View on InterPro
Domain architecture
ALA46459.1
1 516 aa
ATT 3–108 · STR 126–179 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Dickeya phage BF25/12 [NCBI] · taxon 1698708
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host
Dickeya sp. B16 [NCBI] · taxon 1778540
Pseudomonadota Gammaproteobacteria Enterobacterales Pectobacteriaceae Dickeya

Coding sequence (CDS)

Genbank protein accession
ALA46459.1 [NCBI]
Genbank nucleotide accession
KT240186.1 [NCBI]
CDS location
range 3150 -> 4700
strand +
CDS
ATGTACTCAGTTCAGATTGCTGTATCAGACGGCACTCTAGCTCGAATCTCTCTGAGTATCGAGTACTTTGAGAAAGATGATATTACGTTGTACCGCAATCTGGAAACAACCCCTCTGGTACTGGGAACTGATTGGCAATGGGATGGTGATACAACCATTAACCTGCTAACGAATACCCCGGTAACGGATGGGGAGTACATTACGGTTCGACGCAATACAAACATTGACCGTGCATTTAATATCTACGATGGCGGTGCGGCATTCAGCCGAGACACACTAGATGAGAACTTCCGCCAGATGATTTACCTGGCCCAGGAGTTCACAGAAGGGAACGGCCTTACGGGGCTGTTCTTCCCACTGGATATGCACGGTTTCAAGATTACTAACCTGGGTGATGGTACAGACCCTAAAGACGCTGTGAACAAAGGCCAGCTGGATGTAGTAGACCAGCGCGTGACTAATCTGGAGGAATCCTTTGTCACTAACACTGTGAGCTACCCGTGGTATGAACTAACCACAGTGGTAAAGGACACATTCTCCCCACCGTTCGTGTTTGACAAAGCTGCCGTGTTCCTTAACGGCATCTGCCAGACTCTGGGGTACAGTTACGTTGTGGTGAGTAACCAGATTCTGTTAGCCGACCCGGTACCGGTGGGTACTATGTTCTTCGCCCGTCTTGGTGAGGATGTGGGTCTGGACCCGGACTACGCCACCGCAGACCAACTAGCTGCTGCCATTGTTGACCGGGTTGCCGAGGATGCTGCCCTACAGACTCAGGTAGATAGCAAGGCAGCAAAGGGTGTGAACTCGGATATTACCCAGATTACTGGCCTTACTACTCCACTGAGCACTGCACAGGGCGGTACAGGGAACAACACGGGGACTGCACTAACTGCTACCAAGTTGGCTACCGCACGTGCCCTTCAGGTCGCACTGGGTAGTACTACGGCTGCAAGCTTCGACGGTACTGCGGATGTATCACCCGGTGTGTCGGGTACACTCCCACTGGCTAATGGCGGCACGGGGGCTACTGCTGCGCCTGCCGCCAGGACTAACCTCGGCTCCGGCACAACAGGTGATGCTGTGTTCGTTGCCTCTACTCCACTAGCAGGTCGCAACGCGTTACAAGCCGCAACCTACATTGGTGTTGTTGACGGCAGCCCCGCCAGTGCAGGGAATGTTGGCGAGGTGCTAACTGCTGTTAGTGCCTCTCCGGTAGCACTAACCTCTGGGGTAGCAGCTAACGTGACTAGTCTAGCACTTACACCCGGTATTTGGGAGGTGACATCTATTGGACAAAGCATCCCAGCTGGTGGTGGGTCGTCCGGCGGTGTATCCGCGGGATTATCAACCGTATCAGCTACACTACCCACTAACTGGTATGAGGTTTATACTCGTGGGTACTCAGTAAACGGGACAGCTACCACCAGTCTACCTACTCGGATGTTTAACATTACCACGAATACCACTGTGTACTGTGTAGTGAACTTAACGTTTTCGGGGGGCACTTATACTGCTAGGGGCACAATAACCGCACGCAGAATTCGTTAA

Genome Context

Tertiary structure

ALA46459.1
ESMFold structure
Source ESMFold
pLDDT 77.7
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Bateriophages against Dickeya spp. of Phalaenopsis orchids Dreo,T., Naglic,T., Alic,S., Peterka,M. and Ravnikar,M. 2015-10-29 — GenBank