Protein

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Genbank accession
YP_009599186.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGLYMKGSPGTVLHLTESSDARNGVGNDTIFHSSLPHVFITDEWAIPLTNFDASAVGDTYGGWNILGRYKVGSLPAGAINAIKNSSTVTLIEVFYTVNGKEYSKVINGHSITSSFDTGDAWDDWDGRMDFHDYDLHVTMRPGIGVHVGFFVGNKSTDIRQATLDQDSFGINTMRIGGDSEANSFNVARDRLWRCGYNNSFVTIDTSKFYRVGFYGGTYSGILVPPFNNLIGAPRGALANASQKFEKDMQHYSDRDRYANWWLNHRKLGTISGTTKWHGNRNASYMELWDYPTVTFTKIIIRKLNLTYNVNSGYSLTNIVPLTGEIKLDRNDFKVGGVSIKTLAAKMLHQINPSTTGSGYTYMYANPSYDGNGLPNMRSAMPLLGVASDSSINTTSGSSMVSLAPNQHNFLGIQDMKNSGNGWVITPDSIGTQTRTIWGKGGSMALKLLPGATKRVTFGGSEVTLANPESKVIATVALGLATNRASTIIMNLNTTDVRVWLPNEAYYARVGGGIMKLSSNTVPNVGGDHSILVLPINKYVQFMEVKSYKSDSGWADFSDPVVNTWLTNIAFWFRNLGNGNVEISVSHRGAPMPGKKGGNGQSLNANPKFHVPAYTMSIAALS
Physico‐chemical
properties
protein length:621 AA
molecular weight: 67724,50300 Da
isoelectric point:9,05151
aromaticity:0,10306
hydropathy:-0,24815

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage vB_PreS_PR1
[NCBI] 		1931407 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009599186.1 [NCBI]
Genbank nucleotide accession
NC_041913 [NCBI]
CDS location
range 104746 -> 106611
strand -
CDS
ATGGGTCTTTATATGAAAGGAAGTCCGGGGACTGTCCTGCACTTAACAGAGTCCAGTGACGCACGCAATGGGGTTGGTAATGATACTATCTTTCACTCCTCATTGCCACATGTGTTTATAACTGATGAGTGGGCTATCCCATTAACTAATTTCGATGCTTCCGCTGTGGGAGATACATACGGTGGTTGGAATATTCTTGGCAGATATAAGGTAGGGTCACTACCTGCGGGTGCTATAAATGCTATTAAAAATAGTTCTACTGTTACACTTATTGAAGTATTCTACACAGTAAACGGTAAGGAATACTCTAAAGTAATTAATGGCCATAGTATAACCTCCTCGTTTGATACGGGGGATGCCTGGGATGACTGGGATGGGCGTATGGACTTCCATGACTACGATTTACATGTAACAATGCGCCCAGGGATAGGTGTACATGTAGGTTTCTTTGTGGGCAATAAATCTACTGATATTAGACAAGCCACCCTTGATCAAGATTCTTTTGGTATCAATACTATGAGAATTGGTGGTGATAGTGAGGCTAACAGTTTCAATGTTGCTAGGGATAGATTATGGAGGTGCGGGTATAATAACTCATTTGTAACCATTGACACCAGTAAGTTCTATCGTGTAGGATTTTATGGGGGGACTTACTCAGGGATTCTGGTACCTCCATTTAACAATTTAATAGGAGCCCCCCGAGGGGCTTTAGCTAACGCTTCACAGAAATTCGAAAAGGATATGCAGCATTATAGTGACCGCGATAGGTACGCTAACTGGTGGTTAAATCATCGTAAACTAGGTACTATTTCTGGTACTACTAAATGGCATGGAAACCGGAATGCCAGCTATATGGAGTTGTGGGACTACCCTACGGTAACCTTTACCAAGATTATTATCAGAAAGCTGAATCTAACTTATAATGTTAACTCAGGGTATTCTCTGACTAATATAGTCCCTTTAACAGGGGAGATTAAGCTAGATAGGAATGACTTTAAGGTGGGGGGAGTATCTATAAAAACCTTAGCAGCCAAAATGCTGCATCAAATCAATCCTAGTACTACAGGGTCTGGTTATACCTATATGTATGCTAATCCATCATATGATGGTAATGGTCTTCCCAATATGAGGTCTGCAATGCCCTTATTGGGGGTAGCTTCAGATAGTAGTATTAATACTACCTCGGGGTCCTCCATGGTAAGTCTAGCACCAAACCAACATAACTTCCTTGGTATTCAAGATATGAAAAATTCCGGAAATGGGTGGGTAATTACCCCCGACTCTATAGGAACTCAAACTCGGACGATATGGGGGAAAGGTGGGTCTATGGCGCTTAAACTACTTCCTGGGGCAACCAAAAGAGTTACTTTCGGGGGGTCTGAGGTAACATTGGCAAACCCTGAAAGTAAGGTTATTGCTACAGTAGCTCTAGGGCTAGCTACTAATAGGGCCTCTACAATTATAATGAATCTTAACACAACAGATGTCCGTGTATGGCTACCTAACGAAGCATATTATGCCAGAGTAGGGGGAGGTATTATGAAACTTTCCAGCAACACTGTTCCTAATGTGGGGGGAGATCATAGTATTCTTGTCTTGCCTATAAATAAGTATGTACAGTTTATGGAAGTAAAATCATACAAGAGCGATAGTGGTTGGGCTGACTTCTCTGATCCAGTGGTAAATACTTGGCTTACAAATATCGCATTCTGGTTCAGAAATTTAGGTAATGGTAATGTGGAGATATCAGTATCTCACAGAGGTGCCCCGATGCCTGGTAAGAAAGGCGGTAATGGTCAGTCTCTTAATGCTAATCCCAAGTTTCACGTACCAGCGTACACTATGAGCATTGCTGCTCTTTCGTAA

Tertiary structure

PDB ID
dc80dc58088c5fa95918be6195c1f8b91b125cba124e5bcc6547d2fc2f4c6758
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Providencia rettgeri phage vB-PreS_PR1 - a deep-branching member of the T5-like siphoviruses Oliveira,H., Pinto,G., Hendrix,H., Noben,J.-P., Gawor,J., Lobocka,M., Lavigne,R. and Azeredo,J. 2017-12 — GenBank