Phage RBP Database

Genbank accession

QHB43389.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence UniProt/TrEMBL

Probability 1,00

TF

Evidence GenBank

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TF

Evidence RBPdetect

Probability 0,89

TF

Evidence RBPdetect2

Probability 0,96

Protein sequence

MAIYRTGQASMDAQGYITGYETKWREQLALIRPGATIFFIDAPFQAAVISEVVSDTQIRAITTGGAEIGRSNYIILLHDSITVDGLAQDVAETLRYYQSKETQIEEAIEFFKNFDLKQLQDLANQVKGDAEKTAEDRAATEQLKNDTQQIKDSAVAETNQIKADTNAIKAQTQQIKDSAITEVNSARDQGVLAVNQTKDQAVSEMNQIKGDVSNLKNEAISARDSAQQYMTGAQSANNAAETAKNGAVTARNEAEEFAKSLDAENLLKKDANLSDLSNIEVARQNMRVGPFDTVGEHTIIYSPEGSYRLVIKNDGLLIYQKGDGTETKPFEIATGGTGATTVEGARNNLGLGTAQDVQFKSIVATDGDVLVPQARIVGCKTDIGGDKRIYLMNVGGDSNPYGWVNLLQGNWHEGYWRFGGIRGDGTDLNNVQLYMSPNKAGYSGIAFNFIPEQNDAHASGYVRSPRGFMGRCYMGGWDADANNRLTPFWADTVTRNNSGWSPIVSGGSMSDGGYYMRTSLGIISSGTTDWPQVAIHMLGDGRYHRAYNFSESGGIYSWGNDPWGGNYDFAKNPTSDRDLKHDIQYTDGKESYDRVMQWLPTMFKYNGSDIQRFGLIAQDLLKIDPQYVKLVPGSPVFEDVIGVDENGEEYIDHQIETDRKDDTLALDSNVMLTDMACAMVYMGGMIEKQQKEIDELKAAVAALLNK

Physico‐chemical properties

protein length:	706 AA
molecular weight:	77581,28000 Da
isoelectric point:	4,73193
aromaticity:	0,08499
hydropathy:	-0,48938

Domain architecture

QHB43389.1

1 706 aa

CHP 575–700 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

Coil
Unmapped

Coil Coil IPR030392

IPR030392
CHP

IPR030392 Coil

QHB43389.1

1706 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0313
STR

DC_0313

QHB43389.1

1706 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
Coil	Unmapped	-	116	136	Coils	Coil	-	-	-	-
Coil	Unmapped	-	198	218	Coils	Coil	-	-	-	-
IPR030392	CHP	DC_0088	575	700	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	575	629	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	686	706	Coils	Coil	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

QHB43389.1

1 706 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	292	292	0,9854
Central domain	293	491	200	0,3775
C-terminal	492	706	214	0,9357

Note: Constraints were applied during segmentation.
Fixed 11 C-terminal predictions appearing before Central domain

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Shigella phage SFP17 [NCBI] · taxon 2692510

Uroviricota Caudoviricetes Drexlerviridae Hanrivervirus Hanrivervirus SFP17

Host

Shigella flexneri [NCBI] · taxon 623

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

No CDS data available.

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)