Protein

View in Explore
Genbank accession
QHB43389.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIYRTGQASMDAQGYITGYETKWREQLALIRPGATIFFIDAPFQAAVISEVVSDTQIRAITTGGAEIGRSNYIILLHDSITVDGLAQDVAETLRYYQSKETQIEEAIEFFKNFDLKQLQDLANQVKGDAEKTAEDRAATEQLKNDTQQIKDSAVAETNQIKADTNAIKAQTQQIKDSAITEVNSARDQGVLAVNQTKDQAVSEMNQIKGDVSNLKNEAISARDSAQQYMTGAQSANNAAETAKNGAVTARNEAEEFAKSLDAENLLKKDANLSDLSNIEVARQNMRVGPFDTVGEHTIIYSPEGSYRLVIKNDGLLIYQKGDGTETKPFEIATGGTGATTVEGARNNLGLGTAQDVQFKSIVATDGDVLVPQARIVGCKTDIGGDKRIYLMNVGGDSNPYGWVNLLQGNWHEGYWRFGGIRGDGTDLNNVQLYMSPNKAGYSGIAFNFIPEQNDAHASGYVRSPRGFMGRCYMGGWDADANNRLTPFWADTVTRNNSGWSPIVSGGSMSDGGYYMRTSLGIISSGTTDWPQVAIHMLGDGRYHRAYNFSESGGIYSWGNDPWGGNYDFAKNPTSDRDLKHDIQYTDGKESYDRVMQWLPTMFKYNGSDIQRFGLIAQDLLKIDPQYVKLVPGSPVFEDVIGVDENGEEYIDHQIETDRKDDTLALDSNVMLTDMACAMVYMGGMIEKQQKEIDELKAAVAALLNK
Physico‐chemical
properties
protein length:706 AA
molecular weight: 77581,28000 Da
isoelectric point:4,73193
aromaticity:0,08499
hydropathy:-0,48938

Domains

Domains [InterPro]
Coil
116–136
Coil Coil IPR030392
IPR030392
575–629
IPR030392 Coil
QHB43389.1
1 706
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP17
[NCBI] 		2692510 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB43389.1 [NCBI]
Genbank nucleotide accession
MN432485.1 [NCBI]
CDS location
range 10855 -> 12975
strand +
CDS
ATGGCAATTTACAGAACCGGACAAGCGTCAATGGACGCTCAAGGTTATATAACTGGATACGAAACGAAATGGCGAGAGCAACTAGCGCTCATTCGCCCTGGTGCAACAATCTTTTTCATTGATGCACCATTTCAAGCGGCTGTGATCAGTGAAGTTGTCAGCGATACACAAATCCGCGCCATCACAACTGGAGGCGCTGAAATTGGGAGAAGCAACTACATTATTTTGCTGCATGACTCAATCACTGTTGATGGCCTAGCGCAAGATGTTGCGGAAACGCTGCGTTACTATCAAAGCAAAGAAACTCAGATCGAGGAAGCTATTGAATTTTTCAAAAACTTTGACCTAAAACAGTTGCAAGATCTGGCTAATCAGGTTAAAGGTGATGCAGAGAAAACGGCAGAAGATCGTGCTGCTACTGAACAACTGAAAAACGACACTCAACAGATAAAGGATTCTGCTGTTGCTGAAACAAACCAGATTAAAGCAGACACCAACGCAATCAAGGCGCAAACGCAACAGATTAAAGATTCTGCGATAACGGAAGTTAATTCCGCACGCGATCAAGGTGTTTTGGCTGTAAACCAGACTAAAGATCAGGCTGTTTCAGAAATGAATCAGATAAAGGGTGATGTTTCGAATCTGAAAAACGAAGCTATTTCAGCAAGGGATTCAGCCCAGCAATACATGACTGGCGCTCAATCTGCAAATAACGCCGCTGAAACTGCAAAAAACGGCGCTGTTACGGCGAGAAATGAGGCTGAAGAATTTGCTAAAAGCCTTGATGCTGAAAATCTACTCAAAAAAGATGCGAACCTTTCAGATCTGTCTAACATAGAAGTTGCTCGCCAAAACATGCGAGTCGGTCCTTTTGATACTGTTGGTGAACATACGATTATTTACTCGCCAGAAGGATCTTATAGGCTGGTTATCAAAAATGACGGATTACTAATTTATCAGAAAGGTGACGGAACTGAAACCAAGCCATTTGAAATTGCGACTGGTGGGACTGGTGCAACTACTGTTGAGGGTGCTCGCAATAATCTTGGGCTTGGAACTGCGCAAGATGTTCAATTTAAGAGCATTGTTGCCACAGACGGCGATGTTCTAGTGCCGCAAGCTCGCATTGTCGGCTGTAAAACTGATATTGGTGGTGATAAACGCATCTATCTGATGAACGTAGGTGGCGACTCAAATCCATATGGGTGGGTAAACCTATTGCAAGGGAATTGGCATGAAGGATACTGGCGGTTCGGAGGAATCAGGGGCGACGGAACGGATCTAAACAATGTCCAGCTATACATGAGTCCAAATAAAGCAGGATACTCCGGCATCGCTTTTAACTTCATACCTGAGCAGAATGACGCTCATGCTAGCGGGTATGTAAGATCACCTCGCGGTTTTATGGGTCGTTGCTATATGGGTGGCTGGGACGCCGACGCAAATAACAGGTTAACGCCGTTTTGGGCTGACACCGTTACTAGAAATAACAGCGGCTGGTCTCCGATAGTGTCAGGTGGGTCTATGTCTGACGGTGGTTACTATATGAGAACGTCTTTAGGTATTATTTCAAGCGGCACTACCGATTGGCCCCAGGTTGCTATTCACATGTTAGGTGATGGTCGTTATCATCGCGCATATAATTTTAGTGAGTCTGGTGGCATTTATTCTTGGGGTAATGATCCGTGGGGTGGAAACTATGACTTTGCAAAAAACCCAACATCTGATCGTGATTTGAAGCACGATATTCAGTACACGGACGGAAAGGAAAGCTATGATCGCGTGATGCAATGGTTGCCAACCATGTTTAAATACAATGGATCTGATATCCAGCGTTTTGGCCTGATAGCTCAAGACCTGTTAAAAATCGATCCGCAATACGTGAAACTTGTCCCAGGCTCACCAGTATTTGAAGATGTGATCGGGGTTGATGAAAATGGCGAGGAATACATTGATCACCAGATTGAAACTGACAGAAAGGATGATACCTTAGCGCTTGATAGCAACGTTATGCTAACTGATATGGCTTGCGCTATGGTTTACATGGGAGGAATGATCGAAAAACAGCAAAAGGAGATAGACGAATTAAAGGCGGCTGTTGCTGCACTGCTCAATAAATAA

Tertiary structure

PDB ID
0181929a494eb502761231ba87a1dc91e73c85088ab1dd7d369d57462f3fce35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6779
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a Novel Bacteriophage SFP17 Infecting Shigella flexneri Lee,J.-H. and Lee,J.-S. 2016-12-30 — GenBank