Phage RBP Database

Genbank accession

QJA18048.1 [GenBank]

Protein name

tail fiber protein

RBP type

TF

Evidence GenBank

Probability 1,00

Protein sequence

MIDYNGLKTIFGEKLPESHIFFATVAAHKYVPSYAFLRRELGLSSAHTNRKVWKKFVEAYGKAVPPAPPLAFTKNLDKTLAVDTGAAINLSVTVSGGTAPYTYAWTKDGSPLEEASGPNFTKASAAEGDAGTYKVVVTDSKQASLTSNECVTTVTPPLTLSTDLTASMSVEEGAALTLSVAATGGTGPYTYAWTKNDAPIPDATEATYTKSAAAAEDSGAYKVTVTDSKQVSKDSTVCTVTVNPGVGG

Physico‐chemical properties

protein length:	248 AA
molecular weight:	25836,61190 Da
isoelectric point:	5,65346
aromaticity:	0,08468
hydropathy:	-0,14315

Domain architecture

QJA18048.1

1 248 aa

ATT 2–60 · STR 68–243 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR048804
ATT

IPR048804 IPR007110 IPR007110

IPR036179
RBD

IPR036179 IPR013783

IPR003599
STR

IPR003599 IPR003599

IPR013783
STR

IPR013783 PTHR47243

IPR025667
Unmapped

IPR025667 IPR036179

PF13895
Unmapped

PF13895

QJA18048.1

1248 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0400
STR

DC_0400

DC_0444
STR

DC_0444

QJA18048.1

1248 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR048804	ATT	DC_0698	2	60	InterPro cluster	Decoration protein, N-terminal domain	N-terminal	High	Text match	62 proteins / 62 hits
IPR007110	STR	DC_0008	68	146	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR036179	RBD	IPR036179	69	142	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
IPR003599	STR	DC_0008	77	155	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	77	153	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR025667	Unmapped	-	91	106	InterPro	SprB repeat	-	-	-	-
IPR007110	STR	DC_0008	156	243	InterPro cluster	Immunoglobulin-like domain	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR013783	STR	IPR013783	161	242	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003599	STR	DC_0008	165	241	InterPro cluster	Immunoglobulin domain subtype	C-terminal	Medium	Text match	304 proteins / 473 hits
PTHR47243	Unmapped	-	166	242	PANTHER	SIALOADHESIN	-	-	-	-
IPR036179	RBD	IPR036179	166	243	Merged direct domain	Immunoglobulin-like domain superfamily	C-terminal	Low	Positional only	1 proteins / 1 hits
PF13895	Unmapped	-	170	242	Pfam	Immunoglobulin domain	-	-	-	-

Proteins with similar domain architecture

Phage

Salmonella phage vB_Sen_H9 [NCBI] · taxon 2723909

Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes

Host

Salmonella enterica [NCBI] · taxon 28901

cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales

Genbank protein accession

QJA18048.1 [NCBI]

Genbank nucleotide accession

MT233525.1 [NCBI]

CDS location

range 34025 -> 34771
strand +

CDS

ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTGCCAGAATCTCATATCTTCTTTGCTACGGTCGCTGCGCATAAATATGTTCCTAGCTATGCTTTTCTGCGTAGAGAACTAGGACTTTCATCTGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATGGTAAAGCTGTTCCTCCGGCTCCTCCGCTGGCTTTTACCAAGAATCTAGATAAAACGTTGGCAGTTGATACTGGAGCGGCAATTAATCTAAGCGTAACAGTTAGTGGCGGTACAGCTCCCTATACGTATGCTTGGACTAAGGATGGCTCTCCTCTAGAAGAGGCATCAGGACCTAATTTTACTAAAGCTAGTGCTGCTGAGGGTGACGCTGGTACTTATAAAGTAGTAGTTACTGATAGTAAACAAGCTAGTTTAACCTCTAACGAGTGTGTGACTACAGTTACTCCTCCATTAACTCTTTCCACAGATTTAACTGCTAGCATGTCCGTTGAAGAGGGAGCAGCATTAACACTTTCTGTTGCTGCAACTGGCGGTACTGGTCCATATACTTATGCATGGACTAAAAATGACGCTCCTATTCCAGATGCTACAGAAGCTACCTACACTAAATCTGCAGCAGCAGCTGAGGATTCTGGGGCCTATAAAGTAACTGTAACAGATAGTAAGCAAGTAAGTAAGGATTCTACTGTGTGTACTGTGACAGTTAACCCTGGTGTTGGAGGCTAA

Protein

Domains

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)