Protein

View in Explore
Genbank accession
CAF34238.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MARKSIRSNYYIFDASAREVILPGGIQREQLVLITNVTDNKVIYNFSDPELTATEYHISTDIRNVTTTRIVLAYDTTSMSDTDKLQIVYDDFEETIKPSETYHDAVNKSKVSNPQSQIDTDFEYGTQDTKWEALAMINNNPFAYKGQDVLNVSDIQVTTGSKIVTVSSTSNPGAGTAVYIQDSLFPGANGVFITNTSNSNSFTYTAKYPWTFGPGSVYNSARTALYRGVHYTASEIGGAITVSFPGDGSVKVTTSRAHGLEIGNEFGMVGSTGTNVNGSWIVARVESPTIFYYFPDGTPSGTGGTKKLYPRPQGNSVHRAFDGGVKFSTNSTSKNQQSIRQTKRYFRYQSGKGVAFSTGSILAPAIENIDEISSSGTTVTVVAATNHNISKGSQIDVRGCSDNAYNGIYEVTNIVDPFTLQYVVPSTPTQTTTGGEYSVTAINSFGTNLEIGMMDQQNGIFFRYSNGVLSVVRRTSTFQLSGKVSVTNGSTLVSNFTTINGQTTKFAKQLKPGDYVVIRGSSYRVDGIISDTQMVIFPDYRGPTSNDVPVTKTVETEWNQTEWNLDRMDGTGKSGYTLDPTRMQMFYMDYSWYGAGFIRWGFRAEDGNIIYAHKIPNNNVNTEAYMRSGNLPSRYEVNTIPPSTIASKTLSSTDNVLYVADAPVKFPDSGTLRIKKTTSATDGVYEYVNYTSKTSYVKDVFNVSSNIIEVNSTTGLSGGGVQTVHFSIPFSNVVAGKTYYVATVPTSTTFTITDTPGSSTPLTLTDQSGSALSPLSVVSSGSFNGLIREQSGAIAEMIMAAGSSSGVSTLEGIGYQKGQRVIGTGIPDGTSVYSVSGSNIEFSNAVTSANPTATFIPMGTSQEANTFTYSETQPISVELLEATSVPQISHWGSSVIMDGLYDDDRAYVYTVGTKLRRTIGTGGNRTRSVLALRISPSVDNGIIGSFGSRELINRMQLVFRSMDVLSEGQFFVELVLNPIPTISTEWLPVGGTSLAEYSNFDGRSDVDFIGGEVIYGFYAGGSQDNAVPQSYNLESVKEISNSILGGGSNEYTTSSPPDPSGIYPDGPEVVGIRVTNIGSSVAKIDARISWTEAQA
Physico‐chemical
properties
protein length:1095 AA
molecular weight: 118130,52070 Da
isoelectric point:5,08899
aromaticity:0,09863
hydropathy:-0,25890

Taxonomy

Phage
Synechococcus phage S-PM2 [NCBI] · taxon 238854
Uroviricota Caudoviricetes Pantevenvirales Nodensvirus Nodensvirus spm2
Host
Synechococcus [NCBI] · taxon 1129
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae
Host
Synechococcus sp. [NCBI] · taxon 1131
cellular organisms Bacteria Bacillati Cyanobacteriota/Melainabacteria group Cyanobacteriota Cyanophyceae
Host
Synechococcus sp. WH 7803 [NCBI] · taxon 32051
Bacteria Cyanobacteria Oscillatoriophycideae Chroococcales Synechococcus

Coding sequence (CDS)

Genbank protein accession
CAF34238.1 [NCBI]
Genbank nucleotide accession
AJ630128 [NCBI]
CDS location
range 125029 -> 128316
strand -
CDS
ATGGCGAGAAAATCCATTAGAAGTAATTACTATATTTTTGATGCTTCAGCAAGAGAAGTCATCCTCCCTGGTGGTATCCAAAGAGAACAATTAGTTTTGATTACTAACGTTACTGATAATAAAGTAATCTATAACTTCTCGGATCCAGAACTTACTGCTACTGAATATCATATCTCTACTGATATTAGAAATGTCACAACAACTAGAATTGTTTTGGCATATGATACTACATCAATGTCGGACACAGACAAGTTACAGATTGTCTATGATGATTTCGAAGAGACAATCAAACCATCTGAAACATATCATGATGCTGTAAACAAATCAAAAGTATCCAATCCACAATCACAGATTGATACCGACTTTGAATATGGAACACAGGATACAAAGTGGGAAGCGTTGGCAATGATCAACAACAACCCATTTGCTTATAAAGGACAAGATGTTTTAAACGTTAGTGATATTCAAGTTACAACAGGAAGTAAGATTGTAACTGTTTCATCAACATCAAATCCTGGTGCTGGTACTGCTGTTTATATTCAAGATTCTTTATTTCCAGGTGCTAATGGAGTCTTCATTACTAACACAAGTAATAGCAATAGTTTTACATACACCGCAAAGTATCCTTGGACGTTTGGACCAGGAAGTGTATATAATTCAGCAAGAACTGCTCTGTATAGGGGAGTCCATTACACTGCTTCGGAAATTGGAGGTGCAATTACAGTAAGTTTTCCTGGAGATGGTAGTGTAAAAGTTACTACATCAAGAGCGCATGGTCTAGAAATTGGCAACGAATTTGGTATGGTTGGATCCACTGGAACTAATGTCAATGGTTCCTGGATTGTTGCTAGAGTAGAATCGCCAACGATTTTCTATTACTTCCCAGATGGTACTCCAAGTGGAACTGGAGGAACAAAAAAACTATATCCAAGACCACAAGGCAATTCTGTTCATAGAGCATTTGATGGTGGAGTTAAATTTTCAACAAATAGCACATCAAAAAATCAACAATCAATCAGACAAACAAAACGTTACTTCCGTTATCAATCTGGTAAAGGCGTAGCATTCTCAACTGGTTCTATTCTTGCTCCAGCAATTGAAAATATTGATGAAATTTCTTCTTCAGGAACAACAGTGACTGTTGTTGCAGCAACAAATCATAATATCAGTAAAGGATCTCAAATTGATGTTAGAGGTTGTAGCGATAATGCTTACAATGGAATCTACGAAGTTACTAACATAGTAGATCCTTTTACACTACAATACGTAGTGCCATCTACACCAACACAGACTACAACTGGAGGTGAATACTCTGTTACAGCAATCAATTCATTCGGAACCAATCTAGAAATTGGTATGATGGATCAGCAAAATGGTATTTTCTTCCGTTATTCGAATGGTGTTTTAAGTGTTGTTCGCAGAACATCTACATTCCAACTATCTGGAAAGGTTAGCGTCACAAACGGAAGCACACTAGTATCAAACTTCACAACAATCAATGGACAAACAACTAAGTTTGCTAAGCAGTTAAAACCTGGCGACTATGTTGTTATTCGTGGTTCTTCATATCGTGTCGATGGCATTATTTCCGACACCCAAATGGTAATCTTCCCAGATTATCGTGGTCCTACTTCTAATGATGTTCCTGTTACCAAAACTGTAGAAACTGAATGGAATCAGACAGAATGGAACCTTGATAGAATGGATGGAACTGGTAAGTCTGGTTATACATTAGATCCAACTAGAATGCAGATGTTCTACATGGACTACTCTTGGTATGGTGCTGGTTTCATTCGCTGGGGATTTCGTGCAGAAGATGGCAATATAATCTACGCTCACAAAATTCCAAACAATAATGTAAATACTGAAGCCTACATGAGATCTGGTAACTTACCATCTCGCTACGAAGTTAATACTATTCCACCATCAACTATAGCATCAAAAACTCTTTCTTCTACTGATAATGTTTTATATGTTGCTGATGCTCCAGTTAAATTCCCAGATTCTGGAACTCTCAGAATTAAAAAAACTACATCAGCAACTGATGGTGTTTATGAATATGTAAATTACACTTCAAAAACATCATACGTAAAAGATGTATTTAATGTTTCTTCAAATATAATCGAAGTTAATTCGACAACAGGACTATCTGGAGGTGGGGTGCAAACAGTACACTTCAGTATTCCATTCTCAAATGTAGTTGCAGGAAAAACTTACTACGTAGCAACAGTTCCAACATCAACCACATTCACAATTACAGATACTCCAGGAAGTAGTACACCACTAACACTAACTGACCAATCTGGATCTGCATTGTCGCCATTGTCAGTTGTAAGTAGCGGGTCATTTAATGGTCTCATTAGAGAACAATCAGGTGCTATTGCTGAAATGATAATGGCAGCTGGATCTTCTAGCGGCGTCTCCACACTCGAAGGAATTGGTTATCAAAAAGGACAAAGAGTTATCGGAACTGGTATCCCAGATGGAACATCTGTTTATTCTGTCAGTGGATCAAATATTGAATTTAGTAATGCAGTAACTTCCGCTAATCCTACTGCTACATTTATTCCTATGGGAACATCCCAAGAAGCAAATACATTTACTTACTCAGAAACACAACCAATTTCCGTTGAACTACTAGAAGCAACATCAGTCCCACAGATTTCACACTGGGGTTCGTCTGTTATTATGGATGGTCTTTATGATGATGACCGAGCATATGTTTATACTGTTGGTACTAAGTTAAGAAGAACTATTGGGACTGGTGGTAATAGAACTCGTTCTGTTCTTGCTCTTAGAATATCTCCATCTGTTGATAATGGCATTATTGGATCATTTGGATCCAGGGAACTCATCAACAGAATGCAGTTGGTATTCCGTAGTATGGACGTTTTATCGGAAGGTCAGTTTTTTGTGGAACTAGTTCTCAATCCAATTCCAACAATTTCTACGGAATGGTTGCCTGTTGGCGGCACATCACTAGCAGAATATTCAAACTTTGATGGAAGATCTGATGTTGATTTTATAGGCGGTGAAGTTATTTACGGATTCTATGCTGGTGGATCGCAAGATAATGCTGTTCCCCAGAGTTATAACTTGGAATCCGTTAAAGAAATCTCTAATAGCATTCTGGGTGGAGGATCAAATGAGTATACTACATCATCACCACCAGATCCATCTGGTATTTACCCAGATGGTCCTGAAGTTGTAGGTATTAGAGTTACAAATATTGGTAGTAGTGTTGCTAAGATTGACGCTCGTATTTCCTGGACCGAGGCACAGGCATGA

Genome Context

Tertiary structure

CAF34238.1
ESMFold structure
Source ESMFold
pLDDT 73.2
Oligomeric state monomer
Download structure