Protein

View in Explore
Genbank accession
XCO38504.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence Phold
Probability 1,00
Protein sequence
MLNNLNQPKGSTIGVLKDGRTIQQAIDQLGYLPKFTGVYDIIITYGQSNSAGEAILSGSTAGFPQPLPASLMYDFTDGTIKPIIQNIVSANGVASSGHAWGEFANEWYRLSGRGSVVVHCGRGAQTIQALSKGQSNNYYSRMVDGVAAAKVRMAAQGLTIGKVYFMFHQGESDMSSFTPFDTYRGLMIRLNDDVVTDMGVDLFCNFTVGCPANRQEYTWATIQNAQRYCTRGRDNMVTVFDGCPSFLLRDGNIGTEGVHYTQRGYNLMGREGARGLWSKESSGITSKTVPDLEMYSKSVAPWAAAQDVNASIRWAGSTNSWALLQRSNDIGRWHPSNINGIRTATDGNSLEFIVADKASNWFNVRASVNRGLVAQGFKATAEIITMDLDYIVKAVVYCDVEFIVNTVTGEIRAMRTSATPGWLGRNITATVAAPGVVNITHGQSSGYAQATYYGSADGTLTAATVSVNCPDSATTRVNCSVTVNDQNPWVAVRIPNVLIKPDTLYDADATIQISGTYAPEF
Physico‐chemical
properties
protein length:521 AA
molecular weight: 56365,68120 Da
isoelectric point:6,32683
aromaticity:0,09405
hydropathy:-0,14952

Domains

Domains [InterPro]
SSF52266
38–277
SSF52266
IPR005181
40–270
IPR005181
IPR036514
40–296
IPR036514
XCO38504.1
1 521
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146018
[NCBI] 		3232198 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38504.1 [NCBI]
Genbank nucleotide accession
PP889468.1 [NCBI]
CDS location
range 37764 -> 39329
strand +
CDS
ATGTTAAACAATCTGAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAACAGGCCATTGACCAGCTAGGGTATCTGCCCAAGTTCACAGGGGTGTACGACATCATCATAACCTACGGTCAGTCCAACAGCGCCGGGGAGGCAATCCTCTCCGGTTCTACCGCTGGGTTCCCGCAGCCACTGCCAGCGTCCCTGATGTATGACTTCACAGATGGTACCATTAAGCCTATCATCCAGAACATCGTCAGTGCGAACGGTGTGGCTTCGTCAGGGCACGCTTGGGGTGAGTTTGCGAACGAGTGGTACAGACTCTCGGGGAGAGGGTCGGTCGTGGTCCACTGTGGACGCGGTGCTCAGACAATCCAAGCCTTGAGTAAGGGTCAGAGTAACAACTACTACTCTCGCATGGTTGACGGGGTCGCGGCGGCTAAGGTCCGCATGGCCGCTCAAGGGCTGACCATTGGTAAGGTGTACTTCATGTTCCACCAAGGTGAGTCTGACATGAGTTCCTTCACCCCGTTCGATACGTATCGTGGGTTGATGATTCGACTCAATGACGACGTGGTTACTGATATGGGTGTAGACCTTTTCTGTAACTTCACAGTGGGCTGTCCGGCAAACCGTCAGGAATACACATGGGCTACCATTCAGAACGCTCAGCGGTACTGCACACGCGGTCGTGACAACATGGTCACCGTGTTTGACGGCTGTCCTTCCTTCCTGCTCCGTGATGGAAACATCGGGACAGAGGGTGTTCACTATACCCAGCGTGGCTACAACCTGATGGGTCGTGAAGGTGCGCGTGGCCTATGGTCTAAGGAATCTAGCGGCATTACCTCCAAGACTGTCCCAGACCTTGAGATGTACAGCAAGTCTGTGGCTCCGTGGGCGGCTGCTCAGGACGTAAATGCTTCAATCCGTTGGGCTGGCTCCACTAACTCATGGGCTTTATTACAGCGCTCTAACGACATTGGCCGCTGGCACCCGTCTAACATTAACGGAATCCGAACAGCAACCGATGGTAACTCGCTTGAGTTCATTGTTGCGGACAAAGCGTCTAACTGGTTCAACGTGCGGGCGTCGGTAAACCGTGGACTTGTTGCGCAGGGGTTCAAGGCAACCGCTGAGATTATCACAATGGACCTTGACTACATCGTTAAGGCAGTGGTGTATTGTGATGTCGAGTTCATCGTAAACACAGTTACAGGCGAGATTCGGGCCATGCGCACCAGCGCTACTCCGGGCTGGCTTGGTAGGAACATCACAGCGACTGTGGCAGCACCGGGAGTGGTGAACATCACCCACGGACAGTCTTCTGGGTACGCGCAGGCAACCTACTACGGGTCCGCCGATGGTACACTGACAGCTGCCACTGTGTCGGTGAACTGCCCAGACTCAGCAACCACCCGCGTTAACTGTAGCGTTACGGTGAATGACCAGAACCCTTGGGTGGCTGTTCGAATCCCTAACGTCCTCATCAAGCCGGACACTCTGTACGATGCCGATGCGACCATTCAGATTAGTGGTACGTACGCTCCAGAGTTCTAA

Tertiary structure

PDB ID
98f84a6abb00fd1771c5b84b011d79813dc259ae93cc02b29186445cdcceba63
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5919
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank