Phage RBP Database

Genbank accession

YP_010644171.1 [GenBank]

Protein name

tail spike protein

RBP type

TF

Evidence GenBank

Probability 1,00

TF

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,98

Protein sequence

MSKGLYYHIDLERFGIKDDLTEANATTQGFNAALKDAKDQGYHYFVFPEGKYLINAVSNFGGLPEYGGGIRIPSNINIIMDNPYFEAEANDQTGYSIFYLEAVENVKISGIGTICGDRYNHDYVRDLKDDRTKTHEWGFGIHIRGCRRVEIKGLTVKNCTGDNIWIPAKGMMNWPTDYTPSRDILIQDCDLIQGRRNNLATNGCYGLTVERCDIKEAGGDTIGPQLGIDLEGYGDKGIKYDHPYEITIKNNWIKNNGRGALTAHTSGKVLIEGNFTDAVISYAYSTDVKIKDNFIINETGQEKPYGIDSIGVSSSETANRVNISGNTVSGFKTGICARGSKVKIHGNEVEGATAAAIQIYQCEKVEVSDNTTDGNAVGLLIQQSKTVEASDNTFRGSENKYGIKIGQDSSDIILKDNRIRGFGGIFCESAQKVIVRDHDIDLTGSGYGVYFDAKSSVFLDGVTIYNPENTPVYGLADEFAAIMKDVEVIGCKSIIGIYMHGGFGHDIKGNTVRFRRGKDQGYGIFLDGTKSAVLTRNDVLSTDGFKLSAAYKTDGSERTTLIENIQQEVIGGRLAVAPEDRIFVHIER

Physico‐chemical properties

protein length:	588 AA
molecular weight:	64588,55920 Da
isoelectric point:	5,38637
aromaticity:	0,09184
hydropathy:	-0,37364

Domain architecture

YP_010644171.1

1 588 aa

STR 15–575 ·

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

InterPro domains

IPR012334
STR

IPR012334 IPR006626 IPR006626 IPR006626 IPR006626

IPR011050
STR

IPR011050 IPR012334

IPR051550
Unmapped

IPR051550

IPR006626
Unmapped

IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR039448

IPR039448
ENZ

IPR039448 IPR006626 IPR006626

IPR011050
STR

IPR011050

YP_010644171.1

1588 aa

ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped

Novel HMM domains (de novo, PhaRBP-HMM)

Experimental de novo families on regions without InterPro annotation. Separate from the InterPro architecture above.

DC_0453
RBD

DC_0453

YP_010644171.1

1588 aa

InterPro domain annotations

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR012334	STR	IPR012334	15	343	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR011050	STR	IPR011050	27	375	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR051550	Unmapped	-	92	539	InterPro	SCF Complex Subunits and Alginate Epimerases	-	-	-	-
IPR006626	Unmapped	-	103	145	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	138	276	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	146	168	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	181	203	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	204	232	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	243	265	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	285	311	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR039448	ENZ	DC_0799	315	459	InterPro cluster	Right handed beta helix domain	C-terminal	High	Text match	178 proteins / 183 hits
IPR006626	Unmapped	-	318	338	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR011050	STR	IPR011050	325	538	Merged direct domain	Pectin lyase fold/virulence factor	Central	Low	Positional only	572 proteins / 572 hits
IPR006626	Unmapped	-	339	361	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	362	383	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR012334	STR	IPR012334	377	575	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR006626	Unmapped	-	384	407	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	409	453	InterPro	Parallel beta-helix repeat	-	-	-	-
IPR006626	Unmapped	-	502	528	InterPro	Parallel beta-helix repeat	-	-	-	-

Proteins with similar domain architecture

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout

YP_010644171.1

1 588 aa

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	23	23	0,9441
Central domain	24	577	555	0,9975
C-terminal	578	588	10	0,3782

Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary

N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Phage

Bacillus phage Ray17 [NCBI] · taxon 2315627

Uroviricota Caudoviricetes Trautnerviridae Splendidredvirus Splendidredvirus ray17

Host No host information

Genbank protein accession

YP_010644171.1 [NCBI]

Genbank nucleotide accession

NC_070622.1 [NCBI]

CDS location

range 3632 -> 5398
strand -

CDS

ATGAGTAAAGGTCTGTATTATCACATTGACTTGGAACGGTTTGGGATCAAGGACGATCTTACAGAGGCGAACGCAACGACACAAGGATTTAACGCCGCGTTAAAGGATGCGAAAGATCAGGGCTATCACTATTTTGTTTTCCCGGAGGGGAAATACCTGATAAATGCGGTTAGTAATTTCGGAGGACTGCCGGAATACGGCGGAGGAATACGCATCCCATCCAACATTAATATCATCATGGATAACCCGTACTTCGAAGCCGAAGCAAACGACCAGACAGGGTATTCCATCTTCTATCTGGAAGCCGTTGAGAACGTGAAAATATCAGGTATCGGCACGATATGCGGAGACCGATACAATCACGATTACGTCCGGGACTTGAAAGACGACAGAACGAAAACGCATGAATGGGGTTTCGGGATACACATACGGGGGTGCCGCCGGGTAGAAATCAAAGGGCTGACCGTGAAGAATTGTACTGGGGATAATATCTGGATTCCCGCTAAAGGAATGATGAACTGGCCGACCGATTATACACCATCCAGAGACATCTTAATACAGGACTGCGATCTCATCCAAGGTCGCCGCAACAATCTTGCTACCAACGGATGTTATGGCCTCACAGTAGAAAGATGTGACATCAAAGAGGCCGGGGGAGACACAATAGGGCCGCAGTTAGGAATTGATCTTGAAGGATACGGAGACAAGGGGATCAAATATGATCATCCTTATGAGATCACCATCAAGAATAACTGGATCAAAAATAACGGACGCGGCGCTCTGACTGCTCACACAAGCGGGAAGGTGCTCATTGAGGGAAACTTCACCGACGCAGTAATTTCATACGCGTACAGCACAGATGTAAAGATCAAGGACAACTTTATAATAAATGAAACGGGACAAGAAAAGCCTTACGGCATTGACTCTATAGGGGTGTCCAGTTCAGAAACAGCGAACCGCGTGAACATTTCAGGCAACACCGTTTCCGGGTTTAAAACAGGCATATGTGCCCGGGGAAGTAAAGTGAAAATCCATGGTAACGAGGTAGAGGGAGCGACGGCCGCCGCCATTCAGATTTACCAATGCGAAAAAGTTGAGGTTTCAGACAACACGACAGACGGAAACGCAGTCGGACTTCTGATCCAACAGTCAAAAACGGTTGAAGCGTCAGACAACACGTTCCGGGGATCAGAAAACAAGTACGGTATAAAAATCGGTCAGGATTCATCTGACATCATCCTGAAGGACAACCGAATTAGAGGTTTCGGCGGTATATTCTGCGAAAGTGCTCAGAAGGTTATCGTAAGGGATCACGACATAGACTTAACAGGATCAGGATACGGGGTTTACTTCGACGCAAAAAGTAGTGTGTTTCTCGATGGTGTGACTATTTACAACCCAGAAAACACACCTGTTTATGGATTAGCTGATGAATTCGCGGCCATCATGAAGGATGTTGAGGTGATCGGATGCAAATCCATAATAGGAATTTATATGCACGGTGGATTCGGTCACGACATAAAGGGCAATACCGTCCGATTCAGGCGCGGGAAAGATCAGGGGTATGGGATATTCCTCGACGGGACAAAAAGCGCTGTATTGACTCGAAATGACGTTTTAAGCACTGATGGATTTAAGCTGTCTGCCGCATACAAAACGGACGGAAGCGAACGAACAACGCTGATCGAGAACATACAGCAGGAAGTTATTGGAGGTAGGTTGGCAGTAGCACCAGAAGATCGGATTTTTGTACACATTGAGAGATAG

Protein

Domains

Tail Spike Domain Segmentation

Taxonomy

Coding sequence (CDS)

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)