Protein

View in Explore
Genbank accession
AGH56668.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSHPEIYYRPEGSFGPICDALVVLDDDLGRGALRLQDDDGDGPEDPDEDVFGPYEDGKVTQPVRRIVCKKNPDTGELYNCRVEYTPEGGDKWFPEPPCYFEIDGECYNFPEAAAKEFGLQDDFFVPPLNPETCLPFRNDLNIAPITRVREDGSTYKLYPVERSNPVTFPVTSGAVEGASLDVKFSDDGNSIVVRGDSTDSGTAVCTLSWDDDPTNNGTALGKISIPVTEVDTNSAPTTWTQSNIYDAASLPGASLTGVALLYFGNGIGEIGQFAPPDGNTSGTQYFAFGTPTTSPFSTQQTLRRVEFTADLTGSRTLFVHAISGNDRNGGERINNIGEGLRVIWPDNSEQVLLPSRQDWVADTGGSYSEYDDRYDNWSLLNVNIPEQYRTTGVSIKLQQNIVSGPEFQREDIQVYFNSAGDLVVDGNGDAEVTLKFAWDDNPNQHGVALGTWSANGVTFTQTTGIPEGNDTQTMNVVAGNVYSATITGNPGGFTVDSDDEGNTRQVLCFKDNDGDDCNATLEIHKVKKGVNTIVENNPNGGDALGVAAVGWGGAASFEQAERGSESHKFNVSANQTYPITFTDLNPANTTIKVRDDNTRLIFYDGAGTDTNAEFFIDSVENTVGSTAAGYWSDVGNRYAVWVNPAVCTLPCLTQTITYQITFPATDKYFFEFGCDDNAKVFFGEEEVPILDVAGGIFRSGALSTPYVVEKTVTAGTHTVVVVITNSNPRGNERTVDAVFIPYSAVRRAANNPDGYTDALGTFGLLDYTNPARYFSVISRSVAEEYITGRFGRTETITGQYVFRGRGPDKNGHLSHVNYYVSQGGSRSDTTLNATAWAATKQNIYDNYVSGGEINEGNVIRTYYPDCSTDSPVGKSGTDTNDWALDWGKNPGGYYMRICRGTPCSDGESLDWVKSGPHNAWGDFMDEYAVFASNFETYHGIPQTITYSIDIPVDGTYIIEYAADDNMQLDWDGTNIINHGGFTTSTTSTFNFTAGTHDLKMQVTNQANSANADNWDKNPAGGAWKITKQTPSINVVFNSDGGVDVLGVGKAAVTFDFEWDDNPNDDGKALNYWTIPGVKFSQGNATTGSASKTVVLEAGSYRPTIRGNTGGFVLQNNNSEIHFRDQDGTDTNAQISITSIEQIIRSSTDLDKAGENNLIWHTRQDVLYDYIEIGS
Physico‐chemical
properties
protein length:1174 AA
molecular weight: 127731,83670 Da
isoelectric point:4,33303
aromaticity:0,10562
hydropathy:-0,46746

Tail Spike Domain Segmentation

Segmented into three structural domains: N-terminal, central, and C-terminal.

Domain layout
AGH56668.1
1 1174 aa
Domain Start End Length (AA) Confidence
N-terminal 1 245 245 0,7907
Central domain 246 708 464 0,6552
C-terminal 709 1174 465 0,0606
N-terminal Central domain C-terminal

View these domains on the 3D structure via the Color by → Tail spike option in the Tertiary structure section below.

Taxonomy

Phage
Cyanophage Syn10 [NCBI] · taxon 536472
Viruses Duplodnaviria Heunggongvirae Uroviricota Caudoviricetes
Host No host information

Coding sequence (CDS)

Genbank protein accession
AGH56668.1 [NCBI]
Genbank nucleotide accession
HQ634191 [NCBI]
CDS location
range 154271 -> 157795
strand -
CDS
ATGAGTCACCCTGAAATTTATTATAGACCTGAAGGAAGTTTTGGTCCTATCTGTGATGCACTTGTTGTCTTGGACGATGATCTTGGACGAGGTGCATTGCGTTTGCAGGATGACGATGGTGATGGACCTGAAGATCCTGATGAGGATGTATTTGGACCATATGAAGATGGTAAGGTTACTCAACCAGTCAGAAGAATTGTATGTAAGAAAAATCCTGATACGGGAGAGTTATATAATTGTCGTGTAGAATATACACCTGAAGGTGGGGACAAATGGTTTCCAGAACCACCATGCTACTTTGAAATTGATGGTGAATGCTATAATTTTCCCGAAGCAGCGGCAAAGGAATTTGGATTGCAAGATGATTTCTTTGTTCCTCCACTAAATCCAGAAACCTGTTTGCCATTTAGAAATGATCTAAACATTGCACCTATCACTAGGGTCCGTGAGGATGGATCGACATATAAACTATATCCTGTAGAAAGATCAAACCCTGTTACCTTTCCTGTCACCTCTGGGGCAGTAGAAGGAGCATCACTTGACGTTAAATTTAGTGATGATGGCAATTCTATAGTTGTTAGAGGTGATAGCACTGACAGTGGCACTGCTGTTTGTACACTGAGTTGGGATGATGATCCAACTAACAATGGCACTGCACTTGGTAAAATTAGTATTCCTGTTACTGAAGTTGATACTAATAGTGCTCCTACAACATGGACACAAAGTAATATTTACGATGCTGCTTCTCTGCCTGGTGCATCGCTGACGGGTGTAGCACTACTTTACTTTGGTAATGGTATTGGTGAGATTGGTCAGTTTGCTCCACCAGACGGTAATACTTCTGGCACACAATACTTTGCTTTTGGCACACCTACTACGAGTCCATTCAGCACACAACAGACACTGAGAAGAGTTGAATTTACTGCTGATCTTACTGGATCTAGGACATTATTTGTCCATGCTATTTCTGGTAATGATAGAAATGGTGGTGAAAGAATTAATAATATTGGAGAGGGTCTGAGAGTTATTTGGCCTGACAATAGTGAGCAAGTTTTACTTCCATCTAGACAGGACTGGGTAGCAGATACTGGTGGAAGTTATTCAGAGTATGATGATAGGTATGATAATTGGTCTTTGCTCAATGTAAATATTCCTGAGCAGTATCGGACAACTGGTGTTTCTATTAAACTACAACAAAACATTGTATCTGGACCTGAGTTTCAGCGTGAAGACATTCAAGTTTACTTTAATTCTGCTGGCGATCTGGTTGTTGATGGTAACGGTGATGCTGAGGTGACACTTAAGTTTGCATGGGATGATAACCCAAACCAGCATGGTGTTGCTTTAGGCACATGGTCTGCAAATGGTGTTACATTCACACAAACTACAGGTATTCCTGAGGGCAATGACACACAGACAATGAATGTTGTTGCTGGTAATGTTTACAGTGCAACTATCACTGGAAACCCTGGTGGATTTACTGTTGATTCTGATGATGAAGGTAACACTAGACAGGTGCTTTGTTTCAAAGATAATGATGGTGATGATTGTAATGCCACCTTAGAAATTCACAAAGTAAAAAAAGGTGTTAATACTATTGTAGAAAACAATCCTAATGGTGGTGATGCTTTGGGTGTTGCTGCTGTTGGTTGGGGTGGTGCTGCATCTTTTGAGCAAGCAGAAAGAGGATCTGAGTCACATAAGTTTAATGTTTCTGCAAATCAAACATATCCTATTACTTTTACAGATCTGAATCCTGCTAACACAACTATTAAAGTTAGAGATGATAATACTAGATTGATTTTTTATGATGGTGCTGGTACAGATACCAACGCAGAGTTTTTTATTGACTCTGTAGAAAATACGGTGGGATCTACAGCAGCAGGATACTGGTCTGATGTTGGCAATAGATATGCAGTGTGGGTTAATCCTGCTGTCTGCACACTTCCTTGCTTGACTCAAACAATTACATATCAAATAACATTCCCTGCTACTGACAAATACTTCTTTGAGTTTGGATGTGATGATAATGCCAAAGTTTTCTTTGGAGAAGAAGAAGTGCCCATTCTAGATGTGGCGGGAGGTATTTTTAGAAGTGGTGCATTGTCAACTCCTTATGTTGTAGAGAAGACTGTAACTGCAGGGACGCACACAGTTGTTGTAGTTATCACTAATTCAAACCCTCGTGGTAATGAAAGGACTGTAGATGCAGTTTTTATCCCATATTCTGCTGTTAGGAGAGCGGCAAATAATCCTGATGGATATACTGATGCTTTAGGTACATTTGGGCTCTTAGATTATACAAATCCTGCTAGATATTTTAGTGTCATTAGTAGATCTGTTGCTGAAGAATATATTACAGGAAGGTTTGGACGCACAGAGACAATTACTGGACAGTATGTCTTTCGTGGTAGAGGACCAGATAAGAATGGTCACCTTTCACATGTAAATTATTATGTTTCTCAAGGTGGATCTAGGTCTGATACAACATTAAATGCTACTGCGTGGGCAGCAACAAAGCAAAACATCTATGATAATTATGTAAGCGGTGGTGAAATCAATGAAGGAAATGTCATCAGAACATATTATCCAGACTGCTCCACAGATAGTCCTGTTGGTAAATCGGGCACAGATACAAACGATTGGGCACTAGATTGGGGAAAGAATCCTGGTGGATACTATATGAGGATCTGTAGAGGAACACCATGTAGTGATGGTGAATCATTGGATTGGGTTAAGTCTGGTCCACATAATGCATGGGGTGATTTTATGGATGAGTATGCTGTATTCGCATCAAATTTTGAAACTTATCATGGCATTCCTCAAACTATCACTTATAGCATCGACATTCCCGTTGATGGCACTTATATTATTGAGTATGCTGCCGATGATAATATGCAACTAGATTGGGATGGGACTAATATTATCAACCACGGTGGATTTACTACTTCTACAACGAGCACTTTTAATTTCACTGCTGGTACTCATGATTTAAAAATGCAGGTGACAAACCAAGCCAATTCAGCTAATGCAGATAACTGGGATAAGAATCCTGCAGGCGGTGCTTGGAAAATCACAAAGCAAACACCATCTATCAATGTAGTTTTTAATTCAGATGGTGGTGTTGATGTCCTTGGTGTAGGAAAAGCAGCAGTTACTTTTGATTTTGAATGGGATGATAATCCAAACGACGATGGTAAGGCACTTAACTATTGGACTATTCCTGGAGTTAAATTTTCTCAGGGTAATGCAACTACTGGTAGTGCTTCAAAGACTGTTGTGTTGGAAGCAGGATCATACCGTCCAACTATTAGAGGAAACACTGGAGGATTTGTCCTTCAAAATAATAACTCTGAAATACATTTCCGAGATCAAGATGGCACAGATACTAATGCACAAATAAGTATTACTAGTATTGAGCAGATTATCAGATCCTCAACAGACCTTGACAAAGCAGGGGAGAATAATCTAATATGGCACACAAGGCAGGACGTACTCTATGACTACATTGAAATCGGATCTTAA

Genome Context

Tertiary structure

AGH56668.1
ColabFold structure
Source ColabFold
pLDDT 29.1
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn10 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank