Protein

View in Explore
Genbank accession
BDR25073.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MASAFEDYVNGELPKRVSSIDEPTSVVNGHIPVSTGVGLNTTFVDPVTIPGLKGEDGAPGKDGEQGPPGPVGPAINIIANVDLATFEQDIKPLDTHNVGDAWFVEDRLWVWESPLGNEDPPVKGRWVETGSLRGPDGTGLVIRGRWPNNLELPKTESNKPGDAYSWNNQLWAWMLISGNNPPENPTIDDYDWFPVTPQGERGPEGPEGPKGEDGDIGPEGPQGEPAMPFTIKDSLPSPADLPDPSVAKESEAYLVTMEAGKPGHLFIFVKGAWSDLGTFQGPEGPQGKPGNTGDPGPDGKQGEPGPQGRNLEVVKAVETADDLLTTTGVEQYQGVSVRSTNTVYVLTGQDPTVDISWTAMGSFRGPQGPEGPKGEDGDQGLPGEPGAQGKSAFQVALDNGFTGTEGEWLISLHGKNVVITGAVANEAALPADAPDQAAYFTQDTSTLFVKIDGNWVNSGTHRGPKGEEGPEGPQGPDGKQGEPGPVGEPIQIIAAIDTTEDTPPTATTENQWKAYAVKSTGEVFVNMDGSSWTSIGIMAGPQGKPGEGLNIKGVLTDVSQLPKKDTNPELTTGDSYWVETDNGPMLYTYQGQEIDGYIGPIDLNGEQGIQGVEGPQGPEGKQGGGLLIIYVGDDAGKPAASADNVGKGIAIHTNTEGQVEVFVCIDTEGTFTWESLGVLAMGPEGPQGPEGKQGVPGIPGKTGQKGERGSSWVILPEGQTAPTSIDGNRGDWCIDKTGTVWYKDANWVVFYKLMSVPVSEVDPEDVDKKMVRYKLGWTELPVDEVPNAEVGVFYGRHKATADGAIEWTAIELPTPAIDAVPNPTVNAQYVRKGIAGGKTEWATITFPEIPSDVVRDTAQATKPQGRVAGNWVDVAPLQTDDTLMGMQNGEWVAVPAAVIGEVPSEGANGTNYVREKTASGSKWTPVTIIVDQADATSGQLFLRNAAAKSWTLFQGPNNDVTADGDWVRSRTGTNITWKKLDKSFDVYSLKSSTFTGTALTLTPANQQCYRVQTAANQTITLENGPVDRMVTAVLVLLGKVAMPTLSSAVLQWNNGTPLIVDDLGDTKTILTLLWDGTNWVVSKGAVI
Physico‐chemical
properties
protein length:1087 AA
molecular weight: 115103,38330 Da
isoelectric point:4,37987
aromaticity:0,07176
hydropathy:-0,42971

Domains

View on InterPro
Domain architecture
BDR25073.1
1 1087 aa
STR 49–93 · STR 281–335 · STR 363–411 · STR 462–524 · STR 682–748 ·
ATT Attachment Domain STR Structural Domain RBD Receptor-Binding Domain CBM Carbohydrate-Binding Module LEC Lectin-like Domain ENZ Enzymatic Domain CHP Intramolecular Chaperone LNK Linker/Spacer Domain TAS Tail-Associated Structural TTP Tail Tubular Protein UNK Uncharacterized Domain Unmapped
Proteins with similar domain architecture

Taxonomy

Phage
Pseudomonas phage sp. Brmt [NCBI] · taxon 2972140
No lineage information
Host
Pseudomonas aeruginosa [NCBI] · taxon 287
cellular organisms Bacteria Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales

Coding sequence (CDS)

Genbank protein accession
BDR25073.1 [NCBI]
Genbank nucleotide accession
LC727695.1 [NCBI]
CDS location
range 160950 -> 164213
strand -
CDS
ATGGCTTCTGCATTTGAAGATTATGTAAACGGGGAACTCCCCAAACGGGTATCATCAATTGATGAACCCACTTCTGTAGTTAATGGACACATCCCGGTTTCTACCGGGGTGGGTCTTAATACCACTTTCGTTGATCCTGTCACTATACCTGGATTAAAGGGTGAAGATGGTGCGCCAGGTAAAGATGGCGAACAAGGTCCTCCTGGTCCGGTTGGTCCAGCTATCAATATTATCGCTAATGTTGATCTAGCAACATTCGAACAAGATATTAAACCATTAGATACGCATAATGTCGGTGATGCTTGGTTCGTTGAAGATCGGCTATGGGTATGGGAATCACCGCTAGGTAATGAAGATCCCCCTGTAAAAGGTCGTTGGGTTGAAACAGGTTCACTTCGTGGTCCAGATGGTACTGGTCTAGTTATCCGTGGTCGTTGGCCTAATAACTTAGAATTACCTAAGACTGAAAGTAATAAACCTGGTGATGCTTATTCATGGAATAATCAACTCTGGGCGTGGATGCTTATCTCAGGTAATAATCCGCCAGAGAATCCAACTATTGATGACTATGATTGGTTCCCAGTTACACCACAGGGTGAACGTGGACCTGAGGGCCCCGAAGGTCCTAAAGGTGAAGATGGTGATATTGGTCCTGAAGGTCCTCAGGGCGAACCAGCAATGCCATTCACCATTAAGGATTCACTACCATCTCCAGCTGATTTACCTGATCCATCTGTAGCTAAAGAATCAGAAGCATACTTAGTTACTATGGAAGCTGGTAAACCAGGGCATCTATTCATCTTTGTAAAAGGTGCATGGTCAGACCTAGGTACTTTCCAAGGTCCTGAGGGTCCACAAGGTAAACCAGGTAACACAGGTGATCCGGGTCCCGATGGTAAGCAAGGTGAACCTGGTCCGCAAGGTCGTAACTTAGAAGTAGTTAAAGCGGTTGAAACTGCTGACGATCTATTAACCACCACTGGTGTAGAACAATACCAAGGTGTTTCAGTACGTTCCACCAATACGGTTTATGTACTGACTGGCCAAGATCCGACTGTTGATATCTCATGGACAGCCATGGGTTCATTCCGTGGTCCTCAGGGTCCTGAAGGTCCTAAAGGTGAAGACGGTGATCAAGGTCTACCTGGTGAGCCAGGGGCACAAGGTAAATCGGCTTTCCAAGTAGCATTGGATAATGGGTTCACTGGTACTGAGGGTGAATGGTTAATCAGTCTACATGGTAAGAACGTAGTTATTACTGGTGCTGTTGCCAATGAGGCAGCCCTACCGGCAGATGCCCCTGATCAGGCAGCTTACTTCACACAAGACACATCTACCTTATTTGTTAAGATAGATGGTAATTGGGTAAATAGTGGTACACACCGTGGACCAAAAGGTGAAGAAGGCCCCGAAGGTCCGCAAGGGCCAGATGGTAAACAAGGCGAGCCGGGTCCCGTCGGTGAACCTATCCAGATCATCGCGGCAATTGACACAACCGAAGATACCCCTCCTACAGCAACTACCGAGAATCAGTGGAAAGCATACGCTGTTAAGTCCACGGGCGAAGTATTTGTTAACATGGACGGCAGTAGCTGGACTAGTATTGGTATCATGGCAGGTCCGCAAGGTAAGCCGGGTGAAGGTTTAAACATTAAAGGTGTTCTAACCGACGTATCCCAATTACCTAAGAAGGATACTAACCCTGAATTAACTACTGGTGATTCGTATTGGGTTGAGACCGACAATGGTCCGATGCTTTATACTTACCAAGGTCAAGAGATTGATGGCTATATCGGCCCAATTGACTTAAATGGTGAACAAGGTATTCAGGGCGTTGAAGGTCCTCAGGGTCCTGAAGGTAAACAAGGTGGTGGGCTATTAATTATTTACGTTGGTGATGATGCTGGTAAACCAGCTGCATCTGCTGATAACGTAGGTAAAGGTATTGCCATTCACACCAACACTGAAGGACAAGTAGAAGTATTCGTATGTATTGATACAGAAGGTACATTTACTTGGGAAAGCCTAGGTGTCCTAGCTATGGGTCCGGAAGGCCCACAAGGTCCTGAAGGTAAACAAGGTGTTCCAGGCATACCTGGTAAAACCGGTCAGAAAGGTGAACGTGGATCCTCTTGGGTAATTCTACCTGAAGGTCAAACTGCACCCACCTCTATCGATGGTAACCGTGGCGACTGGTGTATCGACAAAACTGGCACTGTCTGGTATAAAGATGCTAACTGGGTTGTATTCTACAAACTAATGTCAGTTCCAGTTAGTGAAGTTGATCCAGAAGATGTCGATAAGAAAATGGTTCGGTACAAACTCGGTTGGACTGAACTACCTGTTGATGAAGTACCAAATGCCGAGGTTGGTGTTTTCTATGGTCGTCATAAAGCAACAGCTGATGGTGCTATTGAATGGACGGCTATTGAACTACCGACACCTGCTATTGATGCTGTACCTAATCCAACTGTCAATGCACAATACGTTCGTAAAGGTATTGCAGGTGGTAAAACTGAATGGGCTACCATTACATTCCCAGAAATTCCTTCAGATGTAGTACGCGATACTGCACAAGCTACTAAGCCTCAAGGTCGTGTAGCTGGTAACTGGGTTGATGTAGCACCTCTGCAAACCGATGATACTCTAATGGGTATGCAAAATGGTGAATGGGTAGCTGTACCAGCCGCAGTTATTGGCGAAGTACCTAGTGAAGGCGCTAATGGCACTAACTATGTACGTGAGAAAACAGCTAGTGGTTCTAAATGGACACCTGTAACTATTATAGTTGATCAAGCTGATGCTACTAGTGGACAACTATTCCTACGTAACGCTGCGGCTAAATCATGGACTCTATTCCAAGGTCCGAATAATGATGTAACCGCTGATGGTGATTGGGTACGTAGCCGTACTGGTACTAATATTACTTGGAAGAAGCTAGATAAATCATTCGATGTATATAGTCTGAAATCAAGTACATTCACTGGTACAGCTTTAACTCTAACACCAGCTAACCAACAGTGCTATAGGGTTCAAACTGCTGCTAACCAAACCATTACACTAGAGAATGGACCTGTTGATCGTATGGTAACGGCTGTTCTTGTACTACTTGGTAAGGTAGCTATGCCAACACTATCTAGTGCAGTGCTACAGTGGAACAATGGTACTCCATTAATAGTAGATGACCTAGGCGATACTAAAACAATTCTTACTCTCCTATGGGACGGTACTAATTGGGTAGTTTCCAAAGGTGCTGTTATTTAA

Genome Context

Tertiary structure

BDR25073.1
ESMFold structure
Source ESMFold
pLDDT 66.5
Oligomeric state monomer
Download structure

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage Brmt Fujiki,J., Nakamura,T., Nakamura,K., Tmamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank