Protein

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Genbank accession
UPW39487.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MSYHKHAGGFGEWDDSGAFGNTRRSNFVGTRKGLDWDNRSYFTNDGYEIDAASQRNSRYTLNRKELIGNETRPWNISLNYLIKVK
Physico‐chemical
properties
protein length:85 AA
molecular weight: 9865,69040 Da
isoelectric point:9,39390
aromaticity:0,14118
hydropathy:-1,05529

Domains

Domains [InterPro]
IPR044916
1–77
IPR044916
IPR027448
1–84
IPR027448
SSF88874
1–84
SSF88874
UPW39487.1
1 85
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO47
[NCBI] 		2918870 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW39487.1 [NCBI]
Genbank nucleotide accession
OM386662.1 [NCBI]
CDS location
range 162116 -> 162373
strand -
CDS
ATGTCGTATCATAAGCACGCAGGTGGTTTTGGCGAATGGGACGATTCTGGCGCATTTGGTAACACTCGACGTTCAAACTTTGTCGGCACTAGGAAAGGTCTTGACTGGGACAACCGTTCGTATTTCACTAACGATGGTTATGAAATCGACGCAGCGAGCCAACGTAATTCTAGATACACTCTAAATCGTAAAGAGCTTATTGGAAATGAAACCCGCCCATGGAATATTTCTTTAAACTATCTTATTAAGGTAAAATAA

Tertiary structure

PDB ID
320b7146bdfd1faacd8e2e9a0a27a3fed879795b4ca3702157f90dc9668d39f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3996
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank