Protein

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Genbank accession
AKU42948.1 [GenBank]
Protein name
endopeptidase tail family protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MDYHDHLSVMDFNELICENLLDVDYGSFKEYYELNEARYITFTVYRTTHNSFVFDLLICENFIIYHGEKYTIKQTAPKVEGEKVFIEVTAYHIMYEFQNHSIESNKLDDDSSESSKTPEYTLEEYLRYGFANQKTSVKMTYKIIGDFKRKVPIDELGNKNGLEYCKEAVDLFGCIIYPNDTEIGFYSPETFYQRSEKVIRYQYNTDTVSATVSTLELRTAIKVFGKKYTAEEKKNYNPIRTTDIKYSNGFIKEGTYRTETIGSKATINFDCKYGNETVRFTIKKGSQGGIYKLILDGKQIKQISCFAKSVQSETIDLIKNIDKGKHVLEMIFLGEDPKNRIDISSNKKAKPCMYVGTEKSTVLNLIADNSGRNQYKAIVDYVADSAKQFGIRYANTQTNEDIETQDKLLEFAKKQINDTPKTELDVNYIGYEKIEPRDSVFFVHELMGYNTELKVVKLDRSHPFVNAIDEVSFSNEIKDMVQIQQALNRRVIAQDNRYNYQANRINHLYTSTLNSPFETMDIGSVLI
Physico‐chemical
properties
protein length:527 AA
molecular weight: 61003,13650 Da
isoelectric point:5,66255
aromaticity:0,11765
hydropathy:-0,54554

Domains

Domains [InterPro]
G3DSA:6.20.110.10
4–90
G3DSA:6.20.110.10 G3DSA:3.55.50.40
IPR044051
18–92
IPR044051 IPR010572
AKU42948.1
1 527
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauS_phi2
[NCBI] 		1674930 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKU42948.1 [NCBI]
Genbank nucleotide accession
KT186243 [NCBI]
CDS location
range 15571 -> 17154
strand +
CDS
ATGGATTATCATGATCATTTATCAGTAATGGATTTTAATGAATTGATTTGTGAAAATTTACTAGATGTAGATTACGGTTCTTTTAAAGAATATTATGAACTGAATGAAGCTAGGTACATCACTTTTACAGTTTATAGAACTACTCATAATAGTTTTGTTTTCGATTTACTAATTTGTGAAAATTTCATTATTTATCATGGTGAAAAATACACAATCAAGCAGACAGCACCGAAGGTTGAGGGAGAAAAAGTTTTTATTGAAGTTACGGCATATCATATTATGTATGAATTTCAAAATCACTCTATTGAATCAAATAAGCTTGATGACGACAGTAGCGAATCTTCAAAAACGCCAGAATACACGTTAGAAGAGTATTTGAGATACGGATTTGCAAATCAAAAAACTTCGGTCAAAATGACCTATAAAATAATTGGAGATTTTAAGCGAAAAGTACCGATTGACGAATTAGGTAACAAAAACGGCTTAGAATACTGTAAAGAAGCGGTAGACCTGTTTGGCTGTATAATTTACCCAAATGATACAGAGATTGGTTTTTATTCTCCTGAAACATTTTATCAAAGAAGCGAGAAAGTGATTCGATATCAATATAATACTGATACTGTATCTGCAACTGTCAGTACATTGGAATTAAGAACAGCTATAAAAGTTTTTGGAAAAAAGTATACAGCTGAGGAAAAGAAAAATTATAATCCTATTAGAACAACTGACATTAAATATTCAAATGGTTTTATAAAAGAAGGTACTTATCGTACCGAAACAATTGGGTCTAAAGCTACTATTAACTTTGATTGCAAGTATGGTAATGAAACAGTTAGATTTACAATAAAAAAGGGCTCTCAAGGTGGAATATATAAGTTGATTTTAGACGGCAAGCAAATTAAGCAAATTTCTTGTTTTGCTAAGTCGGTTCAGTCTGAAACAATAGATTTAATAAAAAATATTGATAAAGGCAAGCACGTTTTAGAAATGATATTTTTAGGAGAAGACCCCAAAAATAGAATTGATATATCTTCAAATAAAAAAGCTAAGCCTTGTATGTATGTTGGAACTGAAAAATCAACAGTCTTAAATTTAATTGCTGATAATTCAGGTCGCAATCAATACAAAGCAATTGTCGACTACGTCGCAGATAGTGCAAAGCAGTTTGGGATTCGATATGCTAATACGCAAACAAATGAAGATATCGAAACACAGGATAAGCTGTTAGAATTTGCAAAAAAGCAAATAAATGATACTCCTAAGACTGAATTAGATGTTAATTATATAGGTTATGAAAAAATAGAACCAAGAGATAGCGTATTTTTTGTTCATGAATTAATGGGATATAACACTGAATTAAAGGTTGTTAAACTTGATAGGTCACATCCATTTGTAAACGCAATAGATGAAGTGTCTTTCAGCAATGAAATAAAAGATATGGTACAAATTCAACAAGCACTTAACAGACGAGTTATTGCACAAGATAATAGATATAACTATCAAGCAAATCGTATAAATCATTTATACACTAGTACTTTGAATTCTCCTTTCGAGACAATGGATATAGGGAGTGTATTAATATAA

Tertiary structure

PDB ID
0fd2b1e50ddbb99e6fa648bd8cea7547b88ace1b6ae1d27df8092c469871c431
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Efficacy of two Staphylococcus aureus phage cocktails in cheese production El Haddad,L., Roy,J.-P., Khalil,G.E., St-Gelais,D., Champagne,C.P., Labrie,S. and Moineau,S. 2016-01 — GenBank