Protein

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Genbank accession
AXY84888.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MPKKTAPNQGLPYGWIRGEDYWGGPMSDSQIFLDTTLFLTLESLTFSAPPPNAVDGATYVVAANPTGAWAGHEGDVAVYVEKVWTFYTPRYGWRARVRSYEKFLWFNGTTWLDEATGEDPVNPEPDPSVKPKWYDIGVTVSDSMYANEPVVHLPILDPMYLPANMVGSQFDMADGASPAYYQFRVQRNGQNVATMTVEIGNFNASFSTTGGNPVSFAAGDRLTVRAQQEAVAGMKNFGFVIRMGLV
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27104,14110 Da
isoelectric point:4,74466
aromaticity:0,13415
hydropathy:-0,23902

Domains

Domains [InterPro]
IPR021251
32–111
IPR021251
AXY84888.1
1 246
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Siskin
[NCBI] 		2316013 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY84888.1 [NCBI]
Genbank nucleotide accession
MH631453.1 [NCBI]
CDS location
range 33155 -> 33895
strand +
CDS
ATGCCGAAAAAGACAGCCCCGAATCAGGGGCTACCCTACGGGTGGATTCGCGGGGAAGACTATTGGGGTGGCCCGATGTCCGACTCGCAAATCTTCCTCGACACCACGCTATTCCTGACACTGGAATCGCTGACCTTCTCCGCTCCGCCGCCTAACGCGGTGGACGGGGCCACCTACGTCGTCGCGGCTAACCCGACGGGGGCGTGGGCCGGGCATGAAGGCGATGTGGCCGTGTACGTGGAAAAGGTCTGGACGTTTTACACGCCTCGCTACGGGTGGCGCGCTCGCGTTCGTTCGTACGAGAAATTCTTGTGGTTCAATGGCACGACGTGGCTTGACGAGGCGACCGGGGAAGACCCGGTCAACCCTGAACCTGACCCGAGCGTTAAGCCGAAATGGTACGACATCGGCGTGACCGTGTCGGACAGCATGTACGCGAATGAACCCGTCGTGCATCTGCCGATCCTTGACCCGATGTATCTGCCTGCCAATATGGTTGGCTCACAGTTCGACATGGCCGACGGCGCAAGCCCGGCCTATTACCAGTTCCGCGTGCAGCGTAACGGCCAGAACGTCGCAACGATGACCGTGGAAATCGGTAACTTCAACGCATCGTTTTCCACGACCGGGGGCAACCCGGTATCATTCGCAGCCGGGGATCGCCTGACGGTTCGCGCGCAGCAGGAAGCCGTCGCGGGGATGAAAAACTTTGGCTTCGTAATTCGCATGGGACTGGTCTAA

Tertiary structure

PDB ID
348772a49158b89cc5a43b3565be6d932925cc37211300190525a7957f192ff7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Salmonella enterica Serovar Typhimurium Siphophage Siskin O'Leary,C., Xie,Y., Kongari,R., Gill,J.J. and Liu,M. 2019 31048394 GenBank