Protein

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Genbank accession
YP_009844060.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence Phold
Probability 1,00
Protein sequence
MSVDNLNKFIKVSKNYQDVPGNNYLEGGFDGNINHLLEIKDGKTYLDLSYADFGLTPAAIKDQLKGMEYSLTDPITDEPWSDDFYIGLIDQSVADTEKEFDITILPREKFDRLDYSRGDFNSFMYTRTYFRPILYVEQVKLYFNNQTILNYPQDWLKVNERAGQLEVQPSLLASSWGGGVNVPYLAITGYPYGTPPVDNHEFAPQMIGVQYVCGMLPNAGDYRYTDWQLQPDLAAYIAKKGAIQVLERWGRNILGPGIAGEEASIDNMSSRIETTQSAEYTASTADINLLKSDMKDNQSRLKAYYGTNIGVIA
Physico‐chemical
properties
protein length:313 AA
molecular weight: 35317,15280 Da
isoelectric point:4,56704
aromaticity:0,12141
hydropathy:-0,42109

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage 3-521
[NCBI] 		2510943 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009844060.1 [NCBI]
Genbank nucleotide accession
NC_048753.1 [NCBI]
CDS location
range 46115 -> 47056
strand +
CDS
ATGTCAGTAGACAACTTAAATAAGTTTATTAAGGTATCCAAAAATTATCAGGATGTACCTGGGAATAATTATTTGGAGGGTGGTTTTGATGGAAACATAAACCACTTATTGGAAATAAAGGATGGTAAAACGTACCTTGATTTAAGTTATGCAGACTTTGGATTAACACCTGCTGCAATTAAGGACCAGTTAAAAGGTATGGAATACTCTTTAACTGACCCTATTACGGATGAGCCTTGGTCTGATGACTTTTACATTGGTCTGATTGACCAATCTGTTGCAGACACTGAAAAGGAATTTGATATAACTATTTTGCCGCGAGAAAAGTTTGACCGATTAGACTACTCAAGAGGAGATTTTAACTCTTTTATGTACACTAGGACGTACTTTAGACCTATTTTGTATGTAGAACAGGTTAAACTTTACTTTAATAACCAGACTATTCTCAATTATCCACAGGACTGGTTAAAGGTTAATGAACGGGCTGGTCAATTAGAGGTTCAGCCTAGCTTGCTTGCTAGTTCATGGGGTGGTGGGGTTAATGTACCATACTTAGCTATTACCGGTTACCCTTATGGTACACCACCAGTAGATAATCATGAGTTTGCTCCGCAAATGATTGGAGTACAGTATGTTTGTGGTATGTTACCTAATGCAGGGGACTACCGTTATACAGATTGGCAACTACAACCAGACTTAGCAGCATACATTGCCAAGAAGGGTGCTATTCAGGTACTAGAACGCTGGGGACGTAATATTTTAGGACCTGGTATTGCTGGTGAAGAAGCATCTATCGACAACATGAGTTCTCGTATTGAAACTACTCAAAGTGCCGAGTATACTGCATCAACTGCTGATATCAATCTGTTGAAGTCAGATATGAAGGATAATCAGTCAAGATTGAAGGCATACTATGGAACTAACATTGGAGTTATAGCTTAA

Tertiary structure

PDB ID
56ecf707174b2eaacce87f0d37764f002a855707274f4346b3803cd4ac41c00b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6680
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank